The invention discloses a method for extracting endohedral metallofullerene in the technical field of fullerene extraction. The method for extracting the endohedral metallofullerene comprises the specific steps: S1, filling a pre-treated mixture of various rare-earth oxides and graphite powder in a deep hole; S2, enabling the rare-earth oxides to be changed into rare-earth carbides; S3, discharging to generate soot; S4, carrying out reverse discharging, so that a carbon deposition rod is consumed into soot; S5, extracting coarse ashes; S6, drying the extracted coarse ashes in a vacuum manner; S7, collecting and extracting the soot; S8, removing and drying the rest soot; S9, putting the ashes into a high pressure kettle to be extracted; S10, pumping, filtering and drying an extracting solution. According to the method for extracting the endohedral metallofullerene, the ashes generated in the discharging process are further extracted, so that the ashes can be sufficiently utilized and the content of high fullerenes in the product is obviously increased to develop a shortcut for further enrichment, separation and purification of the endohedral fullerene; therefore, the method for extracting the endohedral metallofullerene is especially suitable for larger-scale extraction.