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168 results about "Transcription (biology)" patented technology

Transcription is the first step of DNA based gene expression (gene is a short part of DNA that encodes for a protein), in which a particular segment of DNA is copied into RNA (especially mRNA) by the enzyme RNA polymerase. Both DNA and RNA are nucleic acids, which use base pairs of nucleotides as a complementary language. During transcription, a DNA sequence is read by an RNA polymerase, which produces a complementary, antiparallel RNA strand called a primary transcript.

Method for obtaining SSR (Simple Sequence Repeat) primer of lycium ruthenicum based on transcription sequencing

The invention relates to a method for obtaining an SSR (Simple Sequence Repeat) primer of lycium ruthenicum based on transcription sequencing, and belongs to the technical field of molecular marking techniques of molecular genetics of biology. The method comprises the following steps of (1), carrying out transcriptome sequencing; (2), screening an EST-SSR (Expressed Sequence Tag-Simple Sequence Repeat) site; (3), carrying out primer design; (4), extracting DNA (Deoxyribonucleic Acid); (5), carrying out primer screening; (6), carrying out polymorphic primer screening by using 8-percent native polyacrylamide gel electrophoresis. The method for obtaining the SSR primer of the lycium ruthenicum based on the transcription sequencing, which is provided by the invention, can be used as a method for the correction of a linkage map of a genome between remote species and comparative mapping, and has higher utilization value in two aspects. The greatest advantages of the method are that the development is simple and quick and the expense is low. The general characteristic of the SSR of the lycium ruthenicum is specified by utilizing an SSR molecular marking technique; the SSR primer of the lycium ruthenicum is developed; the foundation is laid for carrying out the research on the genetic diversity, the linkage map construction and the affinity relationship of species resources of the lycium ruthenicum by utilizing an SSR molecular marker, so that the method is better applied to molecular breeding.
Owner:BEIJING FORESTRY UNIVERSITY

Preparation, detection and application of polyclonal antibody of Yam mild mosaic virus

The invention discloses preparation, detection and application of a polyclonal antibody of a Yam mild mosaic virus (YMMV). Based on a YMMV genome, the inventor purifies a nuclear inclusion protein/coat protein (NIb/CP) of the YMMV through prokaryotic expression and uses the nuclear inclusion protein/coat protein to prepare the polyclonal antibody for an immune rabbit. The polyclonal antibody can specifically identify the Nib/CP protein of YMMV through prokaryotic expression and the Nib/CP protein of the YMMV virus which infects common yam rhizome, and generates specific immunity response. On the basis, the inventor further builds a set of efficient, high sensitive and accurate IC-RT-PCR (Immunocapture-Reverse Transcription-Polymerase Chain Reaction, ELISA (Enzyme-Linked Immuno Sorbent Assay) and Western blot methods which can specifically detect the YMMV from a common yam rhizome plant which is infected by YMMV. By applying the invention, a material basis and a technical support can be provided for research on interaction of the YMMV and the host, quick detection of the virus and somatotype and molecular biology study, thereby laying a solid foundation for epidemiologically monitoring and preventing treating the virus.
Owner:GUANGXI UNIV

HPV nucleic acid detection kit based on enzyme-linked immunosorbent assay and application of HPV nucleic acid detection kit

InactiveCN104020291ALow costNo need for amplification and detection equipmentMicrobiological testing/measurementMaterial analysisViral loadBiology
The invention belongs to the technical fields of molecular biology, immunology and nucleic acid chemistry, and particularly relates to an HPV nucleic acid detection kit based on enzyme-linked immunosorbent assay and application of the HPV nucleic acid detection kit. The kit is based on an immunoassay method for detecting high-risk HPV16 type E6 and E7 RNA by using an Sdr monoclonal antibody; a detection process is realized as follows: amplification of a target sequence by using technologies such as inverse transcription and PCR is not needed, an unlabelled DNA probe is used for being hybridized with the HPV16 type E6 and E7 RNA to form a DNA:RNA heterozygote, and then the heterozygote is recognized by using the Sdr monoclonal antibody, and subsequent signal multiplication is performed. A detection method has the advantages of high speed, low cost, high sensitivity, and no need of complicated amplification and detection instruments, and is capable of detecting an initial viral load.
Owner:NANJING UNIV

Method for constructing full-length infectious cDNA [complementary DNA (deoxyribonucleic acid)] of PEDV JS2008 (porcine epidemic diarrhea virus JS2008) strains and application of full-length infectious cDNA

The invention provides a method for constructing full-length infectious cDNA [complementary DNA (deoxyribonucleic acid)] of PEDV JS2008 (porcine epidemic diarrhea virus JS2008) strains and application of the full-length infectious cDNA, and belongs to the field of molecular biology and virology. The method for constructing the full-length infectious cDNA of the PEDV JS2008 strains includes steps of amplifying 6 fragments from reverse transcription products of total virus RNA (ribonucleic acid) of the PEDV JS2008 strains, inserting the fragments into vectors pSMART and carrying out silent mutation on enzyme digestion sites of incision enzymes PflmI at inappropriate locations; carrying out enzyme digestion on various recombinant vectors, recycling target cDNA fragments and connecting the target cDNA fragments with one another to obtain the full-length infectious cDNA of the PEDV JS2008 strains. The reverse transcription products are used as templates. The method for constructing the full-length infectious cDNA of the PEDV JS2008 strains and the application have the advantages that the method is ingenious, is high in efficiency and can be applied to rescuing porcine epidemic diarrhea viruses, and accordingly research on PEDV pathogenic mechanisms and novel vaccine can be carried out.
Owner:JIANGSU ACADEMY OF AGRICULTURAL SCIENCES

Complementary DNA (cDNA) sequence of tobacco NtFT1 genes and transient expression thereof for inducing tobacco early blossoming

The invention relates to a complementary DNA (cDNA) sequence of tobacco NtFT1 genes and transient expression thereof for inducing tobacco early blossoming, in particular to NtFT1 genes of tobacco FT (Flowering locus T) and application of the NtFT1 genes in inducing the tobacco early blossoming, and belongs to the field of genes in molecular biology. The invention discloses a full-length coded sequence of the NtFT1 genes derived from tobacco for controlling the plant blossom time and a protein sequence coded by using the full-length coded sequence. The NtFT1 genes are obtained by performing Blastn comparison and splice site analysis on the data searched from China tobacco genome sequencing planning data through homologous sequence searching. According to the cDNA sequence, a method for performing semi-quantitative polymerase chain reaction (PCR) or reverse transcription-polymerase chain reaction (RT-PCR) on NtFT1 gene specific primers is designed to clone the genes. According to the invention, a potato virus X (PVX) virus expression vector of the NtFT1 genes is also constructed, and the constructed virus expression vector is used for performing diafiltration and infestation on flue-cured tobacco varieties including Hongda and Yunnan tobaccos 87 and K326 through agrobacterium, and can induce the early blossoming of the varieties to prove that the genes have a function of inducing the early blossoming of cured tobaccos. When a PVX virus transient expression system of the NtFT1 genes is used for tobacco breeding, the growing time of the tobaccos can be shortened, and the fixed number of years for breeding a new tobacco variety is reduced.
Owner:YUNNAN ACAD OF TOBACCO AGRI SCI

Single-input multi-output gene loop, expression vector, host cell and application of host cell

The invention relates to the technical field of biology, and discloses a single-input multi-output gene loop. The gene loop selects two pairs of inhibitory transcription factors having good orthogonality and remarkable inhibition efficiency differences and DNAs combined with the inhibitory transcription factors for responding to the cell surface antigen density, and different functional proteins are driven to be expressed according to the intensity of input signals. Effect cells are improved through the single-input multi-output gene loop, and can be driven to differentially express differentfunctional proteins such as cell factors along with density changes of antigens of target cells, and a combination effect on the target cells is achieved. According to the single-input multi-output gene loop, the efficiency for cell treatment of a single antigen can be improved, and the single-input multi-output gene loop is considered in a method for cell treatment of multiple antigens.
Owner:FUDAN UNIV

Preparation, detection and application of polyclonal antibody of yam virus X

The invention discloses preparation, detection and application of a polyclonal antibody of a virus of the potato virus X potyvirus for infecting yam virus X, (yam virus X, YVX). Based on the YVX genome, prokaryotic expression is utilized by an inventor to purify the CP (coat protein) and be used for immune a rabbit to prepare the polyclonal antibody; the polyclonal antibody can specifically recognize the CP of the YVX subjected to prokaryotic expression and the CP of the YVX virus infected by yam, and can generate a specificity immune reaction. Based on the preparation, an efficient, high-flexibility and accurate IC-RT-PCR (immunocapture-reverse transcription-polymerase chain reaction), ELISA (enzyme-linked immuno sorbent assay) and Western blot method is established by the inventor, and YVX can be detected specifically from a yam plant which is infected by the YVX. According to the invention, a material basis and a technical support can be provided for the mutual interaction research of the YVX and a host and the rapid detection, parting and molecular biology research of the virus, and a solid basis is developed for the prevalence monitoring, prevention and treatment of the virus.
Owner:GUANGXI UNIV

Double RT-PCR (reverse transcription-polymerase chain reaction) detection method of CVB (chrysanthemum virus B) and CChMVd (chrysanthemum chlorotic mottle viroid)

The invention discloses a double RT-PCR (reverse transcription-polymerase chain reaction) detection method of CVB (chrysanthemum virus B) and CChMVd (chrysanthemum chlorotic mottle viroid), belonging to the virus detection field of molecular biology. The method comprises the following steps of: (1) sampling from chrysanthemum plants, and extracting total RNA (ribonucleic acid); (2) respectively designing two pairs of specific primers for CVB and CChMVd: CVB-F and CVB-R; CChMVd-F and CChMVd-R; (3) carrying out reverse transcription by taking a random hexamer as a primer to obtain two kinds of cDNA (complementary deoxyribonucleic acid); and (4) amplifying the cDNA by utilizing the RT-PCR technology, and carrying out agarose gel electrophoresis on the amplified products to obtain a 665bp specific fragment for expressing infection of CVB and obtain a 206bp specific fragment for expressing infection of CChMVd. The detection method provided by the invention can be used for simultaneously detecting diseased plants which are compositely infected by CVB and CChMVd, and has the advantages of strong detection specificity, high sensitivity, simple process and cost saving.
Owner:NANJING AGRICULTURAL UNIVERSITY

Pathogen molecule detection method based on nanopore sequencing

The invention belongs to the technical field of biology, and discloses a pathogen molecule detection method based on nanopore sequencing. The pathogen molecule detection method based on nanopore sequencing comprises the following steps: obtaining a throat swab sample or a nasopharyngeal swab sample; carrying out nucleic acid extraction and purification on the obtained throat swab sample or nasopharyngeal swab sample; preparing cDNA (complementary deoxyribonucleic acid); amplifying and purifying the cDNA; preparing a nanopore library and carrying out sequencing; and carrying out bioinformatics analysis to obtain a pathogen molecule detection result. According to the invention, pathogenic molecule detection can be directly carried out on the basis of the clinical samples, the sequencing speed is high, and real-time monitoring can be carried out; and meanwhile, the sensitivity is high and the detection limit is low. According to the invention, with the addition of a universal joint and the one-step PCR amplification during the reverse transcription construction of the nanopore library, the unbiased amplification of all the sequences in the clinical samples can be achieved, so that the pathogenic molecule composition and the abundance in the samples are truly reflected, and more importantly, the detection sensitivity and the detection accuracy are substantially improved.
Owner:GANNAN MEDICAL UNIV

Method for fast detecting genome DNA residues in total RNA sample

The invention provides a method for fast detecting genome DNA residues in a total RNA sample. The method comprises the steps that 1, according to genetic information of a to-be-detected biological material, a gene containing one or more intron sequence is selected as a target, and for the intron sequence, PCR primers are designed; 2, the total RNA of the to-be-detected biological material is extracted, the total RNA or cDNA obtained through reverse transcription of the total RNA is used as a template, and the primers in the step 1 are used for PCR amplification; 3, a PCR amplification productis analyzed. According to the method, only one pair of the primers are designed, so that whether or not the genome DNA residues exist in the total RNA and cDNA samples of the biological material can be detected simply, conveniently and fast; the method provides support for the accuracy of gene expression analysis and has important scientific significance for promoting fundamental research of the molecular biology.
Owner:INST OF VEGETABLE & FLOWERS CHINESE ACAD OF AGRI SCI

Ananas comosus sucrose phosphate synthase (Ac-SPS1) gene, coding protein and gene cloning method thereof

InactiveCN101899453AImprove qualityClear molecular mechanismEnzymesDNA preparationSucrose-phosphate synthasePolymerase chain reaction
The invention provides an ananas comosus sucrose phosphate synthase gene shown as SEQ ID NO:1 and coding protein thereof shown as SEQ ID NO:2, belonging to the technical field of biology. The invention also relates to a cloning method of the gene, and the method comprises the following steps of: extracting total RNA in pineapple fruits; detecting the total RNA in the ananas comosus fruits with agarose gel electrophoresis; carrying out reverse transcription to synthesize a first chain cDNA by using the total RNA as a template and Oligo dT as a primer; carrying out PCR (Polymerase Chain Reaction) amplification, and connecting a PCR product with a pGEM-T easy vector; converting; screening positive clones; and further verifying the screened positive clones by a PCR and then sequencing to obtain an Ac-SPS1 gene. The gene can provide a theoretical basis for researching the mechanism of sugar accumulation of the pineapple fruits from the molecular level.
Owner:SOUTH SUBTROPICAL CROPS RES INST CHINESE ACAD OF TROPICAL AGRI SCI

Primer combination and plasmid for simultaneously detecting 9 kinds of respiratory tract viruses and detection kit

The invention discloses a primer combination and plasmid for simultaneously detecting 9 kinds of respiratory tract viruses and a detection kit and belongs to the technical field of biology. The primercombination comprises primer pairs for detecting an influenza a virus, an influenza b virus, an H7 influenza virus, an NL63 corona virus, a 229E corona virus, a type 2 parainfluenza virus, Bocavirus,a respiratory syncytial virus A, a respiratory syncytial virus B and a human internal-reference GAPDH gene. The detection kit comprises a 2*multiple reverse transcription PCR reaction solution, a reverse transcription PCR enzyme mixed solution, a primer mixed solution, non-RNAase water, a magnetic bead mixed solution, a reported buffer solution, a positive control and phycoerythrin-modified streptavidin. According to the primer combination and plasmid and the detection kit, by virtue of a liquid-phase chip technology, the manufactured detection kit can be used for carrying out qualitative analysis on a variety of respiratory tract viruses simultaneously, and the sensitivity and specificity of detection reach PCR levels; and types of respiratory tract virus infections can be rapidly and accurately judged, early etiologic diagnosis and treatment on clinical respiratory tract infections are facilitated, the shortening of a treatment cycle is facilitated, the medical expense is reduced, and good social benefits are generated.
Owner:GUANGZHOU MEDICAL UNIV

Whole genome cloning method of pelteobagrus fulvidraco bacillus-shaped virus

The invention relates to the technical field of biology and discloses a whole genome cloning method of pelteobagrus fulvidraco bacillus-shaped virus. The method comprises the following steps of: designing 14 specific primers for reverse transcription and 14 pairs of specific primers for PCR, wherein the primer sequences are shown as SEQ ID No.1-SEQ ID No.14; extracting pelteobagrus fulvidraco bacillus-shaped virus RNA; taking the extracted viral RNA as a template, respectively adding the extracted viral RNA into a reverse transcription reaction system and a PCR reaction system by using the primers, cloning the whole genome of the pelteobagrus fulvidraco bacillus-shaped virus by sections under reaction conditions, wherein 13 fragments of the amplified product are 2000bp in size, one fragment is 1000bp in size, a total of 14 fragments contain the entire genome sequence of the pelteobagrus fulvidraco bacillus-shaped virus. The invention provides a cloning method of the whole genome of thepelteobagrus fulvidraco bacillus-shaped virus. The method not only can be used for rapid cloning of the whole genome of the pelteobagrus fulvidraco bacillus-shaped virus, but also can be used for researching molecular biology pathogenic mechanism and molecular epidemiology investigation of the pelteobagrus fulvidraco bacillus-shaped virus, and is convenient to use and has good effect.
Owner:SHAOXING UNIVERSITY

Full-length cDNA nucleic acid linear amplification method and kit

ActiveCN103468670AAddresses deficiencies in active dynamicsHigh sensitivityDNA preparationFull length cdnaLinear amplification
The present invention relates to the field of molecular biology, and particularly discloses a full-length cDNA nucleic acid linear amplification method. The method comprises the following steps: separating and purifying mRNA, carrying out reverse transcription synthesis of first strand cDNA, carrying out first strand cDNA 3' terminal extension to obtain full-length first strand cDNA, enriching and purifying the full-length strand cDNA, synthesizing double-stranded cDNA, and the like, such that the full-length cDNA with both known terminal sequences is synthesized. The full-length cDNA nucleic acid linear amplification method has characteristics of high sensitivity and simpleness, and is suitable for efficient synthesis of the full-length cDNA.
Owner:SHANGHAI OFFO BIOPHARM CO LTD
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