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66 results about "TA cloning" patented technology

TA cloning (also known as rapid cloning or T cloning) is a subcloning technique that avoids the use of restriction enzymes and is easier and quicker than traditional subcloning. The technique relies on the ability of adenine (A) and thymine (T) (complementary basepairs) on different DNA fragments to hybridize and, in the presence of ligase, become ligated together. PCR products are usually amplified using Taq DNA polymerase which preferentially adds an adenine to the 3' end of the product. Such PCR amplified inserts are cloned into linearized vectors that have complementary 3' thymine overhangs.

Method for breeding rmnd5b (required for meiotic nuclear division 5homolog B) gene deletion type zebra fish through gene knockout

The invention discloses a method for breeding rmnd5b (required for meiotic nuclear division 5homolog B) gene deletion type zebra fish through gene knockout and belongs to the field of gene knockout. According to the method, construction of a gRNA expression vector and gRNA in-vitro synthesis are performed through design of a CRISPR/Cas9 (clustered regularly interspaced short palindromic repeats/CRISPR-associated 9) gene knockout target site, micro-injection is performed on an embryo of the zebra fish, the effectiveness of the target site is detected, tail cutting identification is performed, TA cloning is performed on a target sequence, plasmids are subjected to Sanger sequencing, an F1 generation of heritable zebra fish mutants is obtained, the same mutant female fish and male fish are picked from mutants of the F1 generation, hybridization is performed, an F2 generation of the zebra fish mutants is obtained, F2 generation homozygote is picked from the F2 generation of the zebra fishmutants, F3 generation pure-line inheritance is performed, and an rmnd5b gene deletion type zebra fish strain is obtained. The method is lower in off-target rate and has good medical research value inresearch of the correlation between rmnd5b gene deletion and development of other organs.
Owner:HUNAN NORMAL UNIVERSITY

Multi-fragment deoxyribose nucleic acid (DNA) series connection recombination assembly method based on site-specific recombination

The invention belongs to the technical field of biological engineering and synthetic biology, and particularly relates to a multi-fragment deoxyribose nucleic acid (DNA) series connection recombination assembly method based on BT1 integrase and mutation recognition sites thereof. In the method, sixteen pairs of mutational integrase recognition sequences are provided through mutation screening and verification, on the basis, a complete set of related carriers is constructed and comprises a framework carrier and seven TA cloning vectors, the framework carrier can realize escherichia coli-streptomyces coelicolor shuttle, the seven TA cloning vectors comprise mutation substrates and are used for DNA element construction and screening, and a concrete method for multi-fragment external series connection recombination reaction is provided. The method of the invention is simple, fast and efficient and can be used for the multi-fragment fast series connection recombination assembly, and the amplification of series connection products is realized through escherichia coli transformation. The method can be widely used for combination and assembly of standard modules and elements in the synthetic biology.
Owner:FUDAN UNIV

HsCIPK2 gene of Hordeum spontoneum C. Koch on Tibetan Plateau

The invention discloses an HsCIPK2 gene of Hordeum spontoneum C. Koch on Tibetan Plateau. The gene is defined by a nucleotide sequence of SEQ ID NO:1 and has a regulatory sequence defined by SEQ ID NO:2. A method of acquiring the gene comprises the steps of designing an electron probe based on an OsCIPK (CIPK, CBL-interacting protein kinases) homologous gene sequence of paddy rice; searching homologous fragments from an existed nucleotide sequence database of various barley such as an EST (expressed sequence tags) database; obtaining a coding sequence of a targeted gene by methods of cluster analysis, electronic splicing, etc.; conducting composition analysis and function prediction of the targeted gene by the bioinformatics; extracting a total RNA of the Hordeum spontoneum C. Koch; preparing a cDNA and designing a PCR primer; cloning the targeted gene of HsCIPK2 via a PCR technology; conducting TA clone sequencing and sequence analysis on the obtained targeted gene; and on the above basis, designing three primers in a 5'non-coding region of an HsCIPK2cDNA and further cloning the HsCIPK2 gene by utilizing six arbitrary degenerate primers and a Tail-PCR technology. The regulatory sequence is of significance to the research on tissue-specific expression of the HsCIPK2 gene and on response to stresses.
Owner:ZHEJIANG NORMAL UNIVERSITY

Temperature-controlled zero background T-vector precursor and construction method and application thereof

The invention relates to a temperature-controlled zero background T-vector precursor and a construction method and application thereof. The temperature-controlled zero background t-vector precursor is a vector pFLX107, and a sequence of the same is shown in SEQ ID NO.1. Volume of the successfully constructed vector is 3029bp, volume of a T-vector prepared via Xcml enzyme digestion is only 2747bp and approximate to those of various commercial T-vectors in the market at present, and the T-vector can be widely applied to TA cloning of various exogenous PCR (polymerase chain reaction) fragments. Due to presence of temperature controlled lethal gene, positive clone selection of recombined transformants by 100% can be achieved at the temperature of 37 DEG C. Meanwhile, since universal sequencing primer sequence binding sites which can be provided by biological companies are integrated on two sides of a cloning site in the vector, primers are not required to be provided by oneself during sample presentation and sequencing, and cost is further lowered.
Owner:YANGZHOU UNIV

Vector for non-background directed cloning of PCR products, preparation method thereof and application thereof

InactiveCN102628057AAchieve no backgroundTo achieve the effect of directional cloningVector-based foreign material introductionEnzyme digestionAgricultural science
The invention discloses a vector for non-background directed cloning of PCR products, a preparation method thereof and an application thereof. The vector is characterized in that an XcmI box is introduced before the vector screens and labels gene, and the XcmI box is characterized in that a protruded dT end is formed after XcmI enzyme digestion, an inactive ribosome binding site is formed before gene screening and labeling and after sequence splicing, and the screened and labeled gene cannot express during self-joining of the vector. The protruded dT end formed after the XcmI enzyme digestionof the vector prepared in the invention can be applied to TA cloning, and can be filled in by a T4DNA polymerase to form blunt ends, so as to be applied to blunt end joining; the method of the invention has the advantages of easy implementation, and low cost; and effects of no background and directed cloning are reached in the application of two cloning methods.
Owner:WUHAN INST OF VIROLOGY CHINESE ACADEMY OF SCI

Construction method for HA-VP2 gene recombination baculovirus expression vector

The invention discloses a construction method for a gene recombination baculovirus expression vector and relates to a construction method for an HA-VP2 gene recombination baculovirus expression vector. The invention aims to solve the problem that the expression rate of a traditional baculovirus-mediated exogenous gene in a Chinese Hamster Ovary (CHO) cell is low. The method comprises the following steps of: I-, performing polymerase chain reaction (PCR) amplification by taking pMD18-T-VP2 as a template to obtain a target fragment, and performing TA cloning and vector conjugation on the target fragment to obtain pTZF-HA-VP2; II-, respectively performing double-enzyme digestion on nine plasmids and the pTZF-HA-VP2, and connecting target fragments obtained after the enzyme digestion is ended to obtain nine recombination transfer vectors; III-, respectively transforming the nine recombination transfer vectors into competent cells, and extracting to obtain rBac-TZF-X; and IV-, performing transfection on the sf9 cells by the rBac-TZF-X to obtain rBV-TZF-X. According to the construction method for the HA-VP2 gene recombination baculovirus expression vector, the expression rate of the baculovirus-mediated exogenous gene in the CHO cell can be increased through adding a regulatory element WPRE.
Owner:HEILONGJIANG UNIV

A recombinant fowlpox virus transfer vector expressing a fowl adenovirus serotype-4 fiber2 gene, a constructing method thereof and applications of the transfer vector

The invention belongs to the technical field of biology, and mainly relates to a recombinant fowlpox virus transfer vector expressing a fowl adenovirus serotype-4 (FADV4) fiber2 gene, a constructing method thereof and applications of the transfer vector. A pMD19T-Simple vector is adopted as a base of the transfer vector. The FADV4 fiber2 gene, a lacz gene, and fowlpox virus genome replicated non-essential fragments which are LTYB and RTYB used for homologous recombination are inserted in a TA cloning site. The method includes constructing a plasmid pMD-TYB; constructing a plasmid pMD22; constructing a plasmid pMD22-lacz; constructing an intermediate vector pMD22-TYB-lacz; amplifying the FADV4 fiber2 gene; constructing a recombinant fowlpox virus transfer vector pMD22-TYB-lacz-F4; subjecting a chicken embryo Fibroblast to cotransfection with the transfer vector pMD22-TYB-lacz-F4 and a fowlpox virus; performing identification to select a positive product; performing subculture continuously; and identifying expression effects of the recombinant fowlpox virus. The recombinant fowlpox virus transfer vector constructed by the method lays a foundation for development of an efficient recombinant fowlpox virus genetic engineering living-vector vaccine expressing the fowl adenovirus serotype-4.
Owner:WENS FOODSTUFF GRP CO LTD

Fluorescence quantitative kit for antiviral gene Mxa and detecting method thereof

The invention relates to a reagent box, in particular to an anti-virus gene MxA fluorescence quantitative reagent box and the detection method thereof. The reagent box comprises MxA, housekeeping gene GAPDH amplification primers, DNA polymerase a probe used for PCR reaction, and one or more kind(s) of buffer solution thereof. The detection method comprises the following steps: firstly, peripheral blood mononuclear cell PBMC is gathered; secondly, PBMC cells with interferon are irritated; thirdly, a TA clone including MxA and housekeeping gene GAPDH target gene fragments is established; fourthly, real-time fluorescence PCR is adopted to detect the inducible expression of MxA mRNA; fiftyly, the Ct value of samples is judged according to the standard curve and the domain value. The anti-virus gene MxA fluorescence quantitative reagent box and the detection method of the invention have the advantages that after adopting the irritation of the peripheral blood interferon, the expression of the MxA can reflect the therapeutic effect of patients with interferon after being treated, thus patients and doctors have vital significance to select the interferon treatment, and the waste of medical resources is avoided.
Owner:RUIJIN HOSPITAL AFFILIATED TO SHANGHAI JIAO TONG UNIV SCHOOL OF MEDICINE

Method for sifting tumour chemotherapy medicament sensitive gene with RNA interference library

The invention relates to a method for screening sensitive genes to tumor chemotherapy medicament by using an RNA interference library. The method comprises the step of using the RNA interference library with reduced gene expression to reduce medicament sensitive gene expression of tumor cells, so that the medicament sensibility of the tumor cells is weakened, but the medicament tolerance is raised; therefore, the tumor cells survive in high-concentration medication condition and form cell clone; finding and screening the medicament sensitive gene through gene clone; and extracting genome DNA from survived cells, amplifying a DNA fragment inserted from the RNA interference library by RCR, using a TA cloning method to clone the DNA fragment amplified by the RCR, selecting the clone, purifying the DNA, and finally measuring the sequence of the gene to determine screened genes. The method makes first screening of the medicament sensitive genes of liver cancer cells, first determines a batch of real medicament sensitive genes in the world, and is used for (1) guiding medicament selection of tumor chemotherapy, that is, when the sensitive genes aiming at certain medicament expresses normally, recommending the medicament, and when the sensitive genes aiming at certain medicament reduces expression or undergoes mutation, avoiding using the medicament, and (2) developing and applying the genes as biological markers of tumor for evaluating risk and preliminarily surveying pathogeny before diagnosis, classifying and defining the level of the tumor at the diagnosis, and evaluating treatment effect and detecting recurrence after the diagnosis.
Owner:黄行许

Pre-T carrier used for preparing eukaryon expression constructing body and preparation method and application thereof

InactiveCN101629183AKeep gettingSimplify the process of double digestionVector-based foreign material introductionEnzyme digestionInsertion sequence
The invention discloses a pre-T carrier used for preparing eukaryon expression constructing body and a preparation method and an application thereof, relating to the technical field of T carrier preparation. The current pre-T carrier introduces Kozak sequence and XcmI box or AhdI box into current plasmid eukaryon expression carrier, utilizes XcmI enzyme digestion or AhdI enzyme digestion to form a T carrier, and utilizes the T carrier to directly clone PCR product. The preparation method of the current pre-T carrier is as follows: (1) preparing a universal insertion sequence of eukaryon expression carrier containing Kozak sequence and XcmI box; and (2) preparing the eukaryon expression pre-T carrier. The pre-T carrier in the invention exists in the form of plasmid and can be obtained continuously by the amplification of bacteria; the pre-T carrier can be used for directly cloning PCR product, thus simplifying the double enzyme digestion process on the PCR product and the carrier; the design of primer is more simple and convenient; the expression efficiency of the exogenous protein can be improved; the invention is applicable to preparing various eukaryon expression constructing bodies rapidly by the method of TA cloning.
Owner:INST OF AQUATIC LIFE ACAD SINICA

Functional molecular marker of brassica chinensis anthocyan synthesis regulation and control gene and application of functional molecular marker

The invention discloses a functional molecular marker of a brassica chinensis anthocyan synthesis regulation and control gene. The functional molecular marker comprises a brassica chinensis anthocyansynthesis regulation and control gene Pur promoter, coding region InDels markers and InDels marker PCR primer sequences. The invention relates to the technical field of agricultural plant molecular marker assisted breeding. According to the molecular marker technology of the brassica chinensis anthocyan synthesis regulation and control gene, accuracy of the sequences is verified through TA cloning, Sanger method sequencing and the like, a regulation and control gene associated with leaf characters of brassica chinensis is identified, two pairs of Indels markers associated with purple characters are developed according to sequence differences between promoters and coding regions of purple and green brassica parachinensis, two pairs of primers achieve one-step method identification screeningthrough multiplex PCR, materials with the anthocyan synthesis regulation and control gene can be simply, conveniently and rapidly screened and identified from a large amount of brassica parachinensisgerm plasm resources, a technical support is provided for rapidly creating new germ plasm of brassica chinensis, a breeding process can also be accelerated, the consumption of resources is lowered, and the cost is reduced.
Owner:SHANXI AGRI UNIV

Plant expression vector facilitating connection of genes as well as construction method and applications thereof

The invention relates to a plant expression vector facilitating connection of genes as well as a construction method and applications thereof. The vector is prepared through the following steps: cloning 1#, 2#, 3#, 4# and 5# fragments from starting expression vectors pGreenII0229, pCAMBIA3300-35S-HAK, pGH-X6145G (purchased from Shanghai Sangon Biological Engineering Technology & Services Co., Ltd) and pCAMBIA2300 by using a PCR method; respectively carrying out enzyme digestion on the 1# and 2# fragments by using NotI and MIUI to be connected to the obtained product so as to obtain a vector pJWWD-12; respectively carrying out enzyme digestion on the pJWWD-12 and the 3# fragment by using XhoI to be connected to the obtained product so as to obtain a vector pJWWD-123; respectively carrying out enzyme digestion on the vector pJWWD-123 and the 4# fragment by using SacI to connected to the obtained product so as to obtain an expression vector pJWWD-1234; and respectively carrying out enzyme digestion on the pJWWD-1234 and the 5# fragment by using PstI to be connected to the obtained product so as to obtain an expression vector pJWWD-1718 finally. According to the invention, target genes can be conveniently and quickly inserted, and the target genes can be inserted in the vector through TA cloning, thereby greatly simplifying the operation steps, reducing the cost and improving the operating efficiency. The vector disclosed by the invention can provide a strong support for plant genetic engineering breeding, and lay the foundation for the safety evaluation and commercial planting of genetically modified plants.
Owner:TIANJIN UNIV

Method of assembling multiple gene fragments to py-2u vector via yeast and application

The invention discloses a method of assembling multiple gene fragments to a py-2u vector via a yeast and application and relates to the technical field of bioengineering. Homologous sequences homologous to the py-2u vector are added to the two ends of a target gene to be cloned; the obtained gene is divided into multiple small fragments; independent digestion sites are added to two ends of each fragment; the digestion sites at the two ends of each fragment are identical, or different independent ones; each small fragment is acquired through genetic synthesis or PCR (polymerase chain reaction)amplification; the plain end of each amplified product is connected to a cloning vector or is TA-cloned to one small fragment vector; each fragment is subjected to enzyme digestion via one independentdigestion site; the recycled product is applied to next yeast transformation. The constructed Py-2uL may be induced via arabinose to gain a larger copy number in Escherichia coli, so that genetic operations, such as subsequent plasmid extraction, are facilitated; genetic synthesis and assembly of a growth gene can be achieved stably and quickly; the method is simpler than conventional cloning processes and is economical and efficient.
Owner:通用生物(安徽)股份有限公司

A recombinant fowlpox virus transfer vector expressing chicken type 4 adenovirus fiber2 gene and its construction method and application

The invention belongs to the field of biotechnology, and mainly relates to a recombinant fowlpox virus transfer vector expressing the fiber2 gene of chicken type 4 adenovirus (FADV4) and its construction method and application. The vector is based on the pMD19T-Simple vector, and the TA cloning site is inserted into the FADV4fiber2 gene, the lacz gene, and non-essential fragments LTYB and RTYB for genome replication of fowlpox virus used for homologous recombination. The method comprises the following steps: plasmid pMD-TYB; constructing plasmid pMD22; constructing plasmid pMD22-lacz; constructing intermediate vector pMD22-TYB-lacz; amplifying FADV4 fiber2 gene; constructing recombinant fowlpox virus transfer vector pMD22-TYB-lacz- F4: co-transfect chicken embryo fibroblasts with the transfer vector pMD22-TYB-lacz-F4 and fowlpox virus, and identify positive ones, and continue to subculture; identify the expression effect of the recombinant fowlpox virus. The recombinant fowlpox virus transfer vector constructed by the invention lays the foundation for the development of highly efficient recombinant fowlpox virus gene engineering live vector vaccine expressing chicken type 4 adenovirus.
Owner:WENS FOODSTUFF GRP CO LTD
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