The invention relates to a technology for detecting and processing isolated stone groups in the shield excavation karren section, in particular to a method for processing isolated stone groups in the shield excavation karren section, aiming to solve the problems that the isolated stone groups can not be detected accurately and processed rapidly by using the traditional method. The method comprises the following steps: finding out the section probably having the isolated stone groups according to a geological survey report; arranging testing holes along the longitudinal direction of a tunnel in the section having the isolated stone groups, putting PVC (polyvinyl chloride) pipes in the testing holes, disposing dense small holes on the walls of the PVC pipes, sealing the bottom ends of the PVC pipes, filling the testing holes with water, arranging electrodes in the PVC pipes in the adjacent two holes, detecting by crossing holes and collecting data by using a high-density resistivity instrument, and determining the position of the isolated stone; optimizing a blasting design, positioning blasting charges accurately by using a counter weight, blasting the holes at the periphery of the isolated stone first to squeeze to generate a space, and then blasting the holes row by row. The method is used for detecting the isolate stone accurately, adopts a simple process, uses the blasting technology to ensure that the biggest blasted isolated stone is less than 25cm, avoids the secondary blasting and has high isolated stone processing efficiency.