The present invention relates to a piperazine citrate preparation method, and further provides a piperazine citrate with characteristics of safe quality and good stability. The preparation method comprises that: citric acid and anhydrous piperazine are completely dissolved and filtered, and form a salt in a reaction kettle under an appropriate reaction condition, and cooling crystallization, centrifugation, washing and vacuum drying are performed after the complete reaction to obtain the product. The preparation process has characteristics of simpleness, easy operation, extremely small three-waste generation, high yield, low cost, high product purity, and easy industrial production, wherein the yield is up to more than 90%. In the prior art, the piperazine citrate preparation process comprises adopting citric acid and piperazine hexahydrate as raw materials, adopting water as a solvent, and carrying out dissolving, salt forming, alcohol precipitation, centrifugation and drying, and has disadvantages of complex process, large wastewater generation and low yield. With the present invention, the disadvantages in the prior art are overcome.