The present invention discloses a rice seed cold storage method, and relates to a field of agricultural product fresh keeping storage. The method includes the following steps: cleaning and selecting, pre-cooling, sterilization, spraying of a fresh-keeping agent, loading of a moisture bag, warehouse disinfection, controlling of the temperature, controlling of the content of oxygen and carbon dioxide, controlling of the moisture of warehouse and ex-warehousing. The method of the present invention has the following advantages that the cold storage method determines appropriate conditions for the rice seed storage, ensures reasonable temperature, moisture and gas composition inside the warehouse, solves the problems of water losing, aging, yellowing, germination, fast decaying during the process of rice seed storage, improves the rice storage time without destroying the texture of the rice seed, promotes the development of the rice industry, increases the added value and promotes the construction of an agricultural production chain demonstration mode.