The invention relates to a liquid crystal microwave modulation device and a modulation method thereof. The device consists of n liquid crystal cells with the same structure and n channels of driving voltage signal sources A, n=2~10; the structure of the liquid crystal cell is as follows from top to bottom: the first glass substrate, the first ITO electrode, the first An alignment layer, a liquid crystal layer, a second alignment layer, a second ITO electrode, and a second glass substrate; wherein, spherical resin spacers are placed in the liquid crystal layer, and the n liquid crystal cells with the same structure are stacked sequentially from top to bottom , the n-channel drive voltage signal source A is composed of n mutually independent waveform signal generators, and each waveform signal generator is correspondingly connected to a liquid crystal cell. In the present invention, the dielectric constant of each layer of liquid crystal in the direction of microwave propagation can be changed according to the multi-channel driving voltage signals set by the user, and the results of outgoing microwave interference and diffraction can be adjusted.