The invention relates to an intelligent navigation hospital guide method and system and a storage medium thereof. The method comprises the following steps: obtaining the doctor seeing information of a patient, carrying out the analysis based on the doctor seeing information, conducting comparing with a built-in database, and conducting matching with a corresponding attending doctor, so as to obtain the address information of a doctor seeing room; acquiring position information of the patient in real time, and generating and outputting a doctor-seeing route map by adopting a preset route planning strategy based on the address information and the position information; and obtaining the distance between the patient and the doctor-seeing room according to the doctor-seeing route map, judging whether the distance is lower than a distance threshold value or not, if yes, enabling the patient to automatically queue successfully, and generating queuing information. According to the method, whether the patient arrives near the doctor-seeing room or not is judged according to the distance between the patient and the doctor-seeing room on the doctor-seeing route map, and the accuracy is higher; and when the patient arrives near the doctor-seeing room, the patient automatically queues successfully, so that the doctor-seeing efficiency of the hospital is improved, and the doctor-seeing time of the patient is effectively saved.