The invention provides a small-molecule inhibitor with human-derived LRRK2
protein as a target spot and application of the small-molecule inhibitor, belonging to the technical field of
pharmacy. According to the invention, a
kinase structural domain of LRRK2 is taken as a target, a three-dimensional structure of the
kinase structural domain of LRRK2 is constructed by using a homologous modeling method, an I-type inhibitor
binding pocket of the three-dimensional structure is selected, molecular docking is carried out by using a Glide program, and the small-molecule inhibitor LY2019-005 targeting the human-derived LRRK2
protein is virtually screened out from more than 160,000 compounds; a
kinase activity inhibition experiment is carried out, so the inhibition effect of the compound LY2019-005 on the activity of LRRK2 kinase is verified; and
molecular dynamics simulation research is carried out, and the action mechanism of the compound LY2019-005 and
target protein is clarified at a
molecular level. The found
small molecule and a pharmaceutical salt thereof can provide a basis for research and development of novel drugs for treating diseases related to LRRK2, such as Parkinson's
disease, Alzheimer's
disease,
inflammatory bowel disease or Hansen's
disease. The structure of a
lead compound can be further optimized, and the
lead compound has good application prospects.