The invention provides a fractional frequency all-digital phase-locked loop and a control method of the fractional frequency all-digital phase-locked loop. The method includes: S1, the fractional frequency controller generates a delay control word, a frequency division ratio control word, an integer frequency control word and a fractional frequency control word according to an external fractional frequency control word; S2, the clock generation and control circuit is based on the reference clock, The frequency control word generates the clock signal ckr; S3, the digital time converter generates the low frequency clock signal according to the ckr and the delay control word; S4, the feedback signal generating circuit outputs the high frequency clock signal ckv generated according to the frequency division ratio control word and the numerical control oscillator The feedback signal fb; S5, the phase detector generates the phase error digital signal phe of ckr and fb; S6, the auxiliary frequency locked loop outputs the control signal ftl according to the integer frequency control word, the fractional frequency control word and the low frequency clock signal, and the numerical control oscillator according to The addition of ftl and phe and the update of ckv.