The invention belongs to the technical field of breeding, and discloses desert cistanche seed paper and a preparation method thereof. The preparation method comprises the following steps: preparing raw materials: cistanche seeds, yellow clay mud, rolled toilet paper, fresh swimming bladder, bone glue, suaeda glauca, flour, water, starch and newspaper; adding the yellow clay mud into the starch, grinding into powder, adding water for soaking and stirring into a paste, respectively making the suaeda glauca and the flour into a paste, cooking the swimming bladder and soil into fertile water and cooking the bone glue and the soil into glue, sequentially adding into the mud paste, and uniformly stirring; brushing the cut newspaper with the prepared mud paste by using a brush, spreading about 80cistanche seeds on the brushed newspaper, covering the newspaper with a layer of toilet paper with the same size, spreading out the seed paper one by one for drying in the shade, and bundling and bagging 100 pieces of paper in each bag. By the preparation method, the germination rate of the cistanche seeds is effectively increased, inoculation can be effectively performed, and the sowing amount is greatly reduced.