Antibacterial peptide and application thereof
An antibacterial peptide and antibacterial concentration technology, applied to the antibacterial peptide and its application field, can solve the problems of high production cost and low biological activity, and achieve the effects of short synthetic sequence, low hemolytic activity, and large-scale production cost saving.
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Embodiment 1
[0029] The design of embodiment 1 antimicrobial peptide
[0030] Based on the de novo design of antimicrobial peptides and the understanding of the structure-activity relationship, the sequence parameters of 843 antibacterial peptide sequences screened from the ADP3 database with antibacterial effects on Gram-positive and Gram-negative bacteria were analyzed (including Sequence length, charged number, hydrophobic amino acid ratio and amino acid composition), and then according to the selection principle of the highest frequency of occurrence and combined with rational design ideas, the sequence parameters of the new antimicrobial peptide were determined, as follows:
[0031] Table 1 Sequence parameters of de novo designed antimicrobial peptides
[0032]
[0033] In order to reduce the synthesis cost and reduce the cytotoxicity at the same time, the sequence length was selected as 13 which is the second most frequently used. The positively charged amino acid Lys and the pol...
Embodiment 2
[0044] Embodiment 2 antibacterial activity
[0045] Staphylococcus aureus, Escherichia coli and Salmonella were streaked on LB solid medium (Luria-Bertani medium), and Listeria monocytogenes and Streptococcus mutans were streaked on BHI solid medium (Brain heart infusion agar medium), placed in a constant temperature incubator at 37°C for 18 hours, picked a single colony of each strain and placed them in their corresponding liquid medium, and cultured with shaking at a constant temperature of 37°C for 12 hours. Measure the OD of the bacterial solution 600 value (the absorbance value of the solution at a wavelength of 600nm), and dilute it to 1×10 6 CFU / mL.
[0046] ①Inhibition zone test
[0047] Prepare LB and BHI semi-solid medium (mass fraction of agar 0.6%), add 7 μL of bacterial solution to 20mL of each plate, shake and mix well, pour it into the petri dish with Oxford cup placed, and pull out the Oxford cup after the medium is cooled and solidified to complete the infu...
Embodiment 3
[0053] Example 3 Hemolytic activity
[0054] Take 1mL of healthy rabbit blood and add it to a heparin anticoagulant tube, centrifuge at 1000xg for 10min, get the precipitate, wash with PBS buffer 3 times, and resuspend the red blood cells in 10mL of PBS. Adjust the concentration of antimicrobial peptide YHX-1 to 4 μg / mL, 8 μg / mL, 16 μg / mL, 32 μg / mL, 128 μg / mL, 256 μg / mL, 512 μg / mL with PBS buffer, and add an equal volume of red blood cell suspension. Use PBS buffer as a negative control, and 0.1% Tritonx-100 (polyethylene glycol octylphenyl ether) as a negative control, take it out after incubating at 37°C for 1 hour, centrifuge at 1000xg for 10 minutes, take out the supernatant and use a microplate reader Measure the OD value at 570nm.
[0055] The calculation formula of hemolysis rate is: hemolysis rate=(A T -A 0 ) / (A C -A 0 )×100%.
[0056] In the formula: A T is the absorbance value of the experimental group, A C is the absorbance value of the positive control grou...
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