A kind of efficient identification/screening method and application of Clostridium butyricum
A clostridia and butyric acid technology, applied in the field of microorganisms, can solve the problems of difficulty in screening, low proportion, and difficult to obtain, and achieve the effects of improving screening efficiency, speeding up experimental process, and long screening period
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Embodiment 1
[0042] Embodiment 1 identifies the method for Clostridium butyricum
[0043] Design the following primers:
[0044] (1) The sequences of primers CBU21F / CBU1023R are:
[0045] Forward primer: 5'-TCAATTAGAAGGCAGAGTACC-3' (SEQ ID NO: 1)
[0046] Reverse primer: 5'-CTAAAACTGACTGTGGCATT-3' (SEQ ID NO: 2)
[0047] The size of the amplified target gene fragment is 1022bp;
[0048] (2) The sequences of primers CBU80F / CBU551R are:
[0049] Forward primer: 5'-CAAAGTCATCATCTAGTCGT-3' (SEQ ID NO: 3)
[0050] Reverse primer: 5'-TCCATTATAAGCTGGTGCAT-3' (SEQ ID NO: 4)
[0051] The size of the amplified target gene fragment is 491bp;
[0052] (3) The sequences of primers CBU64F / CBU488R are:
[0053] Forward primer: 5'-TACACTCCTATCATCACCCTTTAT-3' (SEQ ID NO:5)
[0054] Reverse primer: 5'-CACCTAAATCGGCAGCAGCAT-3'SEQ ID NO:6
[0055] The size of the amplified target gene fragment is 445bp.
[0056] Template DNA extraction: Genomic DNA was extracted from 20 Clostridium butyricum and 12 ...
Embodiment 2
[0062] Embodiment 2 screens the method for Clostridium butyricum
[0063] Based on the TSN selective medium, the screening of Clostridium butyricum in the fecal samples with the target band amplified was completed. Dilute the samples in a gradient manner, spread 100 μL of each dilution on the TSN selective medium plate, culture anaerobically at 37°C for 48 hours, select a single colony that grows normally under anaerobic conditions, and streak on the TSN selective medium plate After isolation and incubation at 37°C for 48 hours, a single colony similar in colony morphology to Clostridium butyricum was selected. Carry out PCR amplification according to the method of Example 1, and obtain the corresponding specific target band as the target strain.
Embodiment 3
[0064] Example 3 High-efficiency identification / screening of the accuracy detection of Clostridium butyricum PCR amplification primers
[0065] CBU21F / CBU1023R, CBU80F / CBU551R and CBU64F / CBU488R were used as primers to detect the accuracy of PCR amplification primers.
[0066] Extract the genomic DNA of 20 strains of Clostridium butyricum from different samples, use the optimized primers CBU21F / CBU1023R and the reaction system and reaction program in Example 1 to carry out PCR amplification, and detect the specificity of the PCR amplification primers of the present invention. sex. The results of agarose gel electrophoresis figure 1 shown, from figure 1 It can be seen that the specific primer CBU21F / CBU1023R used to amplify Clostridium butyricum in this embodiment can accurately amplify the target sequence fragments of 20 strains of Clostridium butyricum, which is a positive result, and the water control reaction No amplification band was detected, which was a negative resul...
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