Eureka AIR delivers breakthrough ideas for toughest innovation challenges, trusted by R&D personnel around the world.

Meningococcal antigens

a technology of meningococcal and antigen, applied in the field of meningococcal antigen, can solve the problems of inability to use in infants, meningococcal b remains a problem, and the immune response is poor, and achieves the effect of efficient harvesting and convenient purification of recombinant proteins

Inactive Publication Date: 2004-03-23
NOVARTIS AG
View PDF7 Cites 102 Cited by
  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Benefits of technology

The nucleic acid molecules of the subject invention may be included into an expression cassette for expression of the protein(s) of interest. Usually, there will be only one expression cassette, although two or more are feasible. The recombinant expression cassette will contain in addition to the heterologous protein encoding sequence the following elements, a promoter region, plant 5' untranslated sequences, initiation codon depending upon whether or not the structural gene comes equipped with one, and a transcription and translation termination sequence. Unique restriction enzyme sites at the 5' and 3' ends of the cassette allow for easy insertion into a pre-existing vector.
A heterologous coding sequence may be for any protein relating to the present invention. The sequenceencoding the protein of interest will encode a signal peptide which allows processing and translocation of the protein, as appropriate, and will usually lack any sequence which might result in the binding of the desired protein of the invention to a membrane. Since, for the most part, the transcriptional initiation region will be for a gene which is expressed and translocated during germination, by employing the signal peptide which provides for translocation, one may also provide for translocation of the protein of interest. In this way, the protein(s) of interest will be translocated from the cells in which they are expressed and may be efficiently harvested. Typically secretion in seeds are across the aleurone or scutellar epithelium layer into the endosperm of the seed. While it is not required that the protein be secreted from the cells in which the protein is produced, this facilitates the isolation and purification of the recombinant protein.
Packaging cell lines suitable for use with the above-described retrovirus vectors are well known in the art, are readily prepared (see WO95 / 30763 and WO92 / 05266), and can be used to create producer cell lines (also termed vector cell lines or "VCLs") for the production of recombinant vector particles. Preferably, the packaging cell lines are made from human parent cells (eg. HT1080 cells) or mink parent cell lines, which eliminates inactivation in human serum.
Naked DNA may also be employed. Exemplary naked DNA introduction methods are described in WO 90 / 11092 and U.S. Pat. No. 5,580,859. Uptake efficiency rnay be improved using biodegradable latex beads. DNA coated latex beads are efficiently transported into cells after endocytosis initiation by the beads. The method may be improved further by treatment of the beads to increase hydrophobicity and thereby facilitate disruption of the endosome and release of the DNA into the cytoplasm.
Alternatively, the polymerase chain reaction (PCR) is another well-known means for detecting small amounts of target nucleic acids. The assay is described in: Mullis et al. [Meth. Enzytmnol. (1987) 155: 335-350]; U.S. Pat. Nos. 4,683,195 and 4,683,202. Two "primer" nucleotides hybridize with the target nucleic acids and are used to prime the reaction. The primers can comprise sequence that does not hybridize to the sequence of the amplification target (or its complement) to aid with duplex stability or, for example, to incorporate a convenient restriction site. Typically, such sequence will flank the desired Neisserial sequence.
FIG. 8 shows an alignment comparison of amino acid sequences for ORF 40 for several strains of Neisseria (zn07.sub.-- 1, SEQ ID NO:96; zn20.sub.-- 1, SEQ ID NO:104; zn21.sub.-- 1, SEQ ID NO:105; zn06.sub.-- 1, SEQ ID NO:95; zn19.sub.-- 1, SEQ ID NO:103; zn03.sub.-- 1, SEQ ID NO:93; zn18.sub.-- 1, SEQ ID NO:102; zn11_ass, SEQ ID NO:99; zn02.sub.-- 1, SEQ ID NO:92; zn04.sub.-- 1, SEQ ID NO:94; zn16.sub.-- 1, SEQ ID NO:101; zn14.sub.-- 1, SEQ ID NO:100; z2491, SEQ ID NO:91; zn10.sub.-- 1, SEQ ID NO:98; zn22.sub.-- 1, SEQ ID NO:106; zn23.sub.-- 1, SEQ ID NO: 107; zn28_ass, SEQ ID NO: 110; zn24.sub.-- 1, SEQ ID NO: 108; zn25_ass, SEQ ID NO:109; zn08.sub.-- 1, SEQ ID NO:97; zn29_ass, SEQ ID NO:111). Dark shading indicates regions of homology, and gray shading indicates the conservation of amino acids with similar characteristics. The Figure demonstrates a high degree of conservation among the various strains, further confirming its utility as an antigen for both vaccines and diagnostics.

Problems solved by technology

Although efficacious in adolescents and adults, it induces a poor immune response and short duration of protection, and cannot be used in infants [eg.
Meningococcus B remains a problem, however.
This results in tolerance to the antigen; indeed, if an immune response were elicited, it would be anti-self, and therefore undesirable.
This approach produces vaccines that are not well characterized.
They are able to protect against the homologous strain, but are not effective at large where there are many antigenic variants of the outer membrane proteins.
Additional proteins to be used in outer membrane vaccines have been the opa and opc proteins, but none of these approaches have been able to overcome the antigenic variability (eg.
EP-A-0467714, WO96 / 29412), but this is by no means complete.

Method used

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
View more

Image

Smart Image Click on the blue labels to locate them in the text.
Viewing Examples
Smart Image
  • Meningococcal antigens
  • Meningococcal antigens
  • Meningococcal antigens

Examples

Experimental program
Comparison scheme
Effect test

example 1

The following partial DNA sequence was identified in N.meningitidis :

This corresponds to the amino acid sequence :

Further work revealed the complete DNA sequence :

This corresponds to the amino acid sequence :

Further work identified the corresponding gene in strain A of N.meningilidis :

This encodes a protein having amino acid sequence :

The originally-identified partial strain B sequence (ORF40 (SEQ ID NO:2)) shows 65.7% identity over a 254aa overlap with ORF40a (SEQ ID NO:138):

The complete strain B sequence (ORF40-1 (SEQ ID NO:4)) and ORF40a (SEQ ID NO:6) show 83.7% identity in 601 aa overlap:

Computer analysis of these two amino acid sequences gave the following results:

Homology With Hsf Protein Encoded by the Type b Surface Fibrils Locus of H.influenzae (Accession Number U41852)

ORF40 (SEQ ID NO:2) and Hsf protein (SEQ ID NO:139) show 54% aa identity (SEQ ID NO:140) in 251 aa overlap:

ORF40a also shows homology to Hsf:

Based on homology with Hsf, it was predicted that this protein from...

example 2

The following partial DNA sequence was identified in N.meningitidis

This corresponds to the amino acid sequence :

Further work revealed the complete nucleotide sequence :

This corresponds to the amino acid sequence :

Computer analysis of this amino acid sequence reveals a putative prokaryotic membrane lipoprotein lipid attachment site (underlined).

Further work identified the corresponding gene in strain A of N.meningitidis :

This encodes a protein having amino acid sequence :

The originally-identified partial strain B sequence (ORF38 (SEQ ID NO:8)) shows 95.2% identity over a 165aa overlap with ORF38a (SEQ ID NO:159):

The complete strain B sequence (ORF38-1 (SEQ ID NO: 10)) and OR38a (SEQ ID NO: 12) show 98.4% identity in 321 aa overlap:

Computer analysis of these sequences revealed the following:

Homology With a Lipoprotein (Lipo) of C.jejuni (Accession Number X82427)

ORF38 (SEQ ID NO:160) and lipo (SEQ ID NO:162) show 38% aa identity (SEQ ID NO:161) in 96 aa overlap:

Based on this analysis,...

example 3

The following N.meningitidis DNA sequence was identified :

This corresponds to the amino acid sequence :

Computer analysis of this amino acid sequence predicted the leader peptide shown underlined.

Further work identified the corresponding gene in strain A of N.meningitidis :

This encodes a protein having amino acid sequence :

The strain B sequence (ORF44 (SEQ ID NO: 14)) shows 99.2% identity over a 124aa overlap with ORF44a (SEQ ID NO:16):

Computer analysis gave the following results:

Homology With the LecA Adhesin of Eikenella corrodens (Accession Number D78153)

ORF44 (SEQ ID NO:163) and LecA (SEQ ID NO:165) protein show 45% aa identity (SEQ ID NO: 164) in 91 aa overlap:

Based on homology with the adhesin, it was predicted that this protein from N.meningitidis, and its epitopes, could be useful antigens for vaccines or diagnostics.

ORF44-4 (11.2 kDa) was cloned in pET and pGex vectors and expressed in E.coli, as described above. The products of protein expression and purification were analy...

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

PUM

PropertyMeasurementUnit
Fractionaaaaaaaaaa
Fractionaaaaaaaaaa
Fractionaaaaaaaaaa
Login to View More

Abstract

The invention provides proteins from Neisseria meningitidis (strains A & B), including amino acid sequences, the corresponding nucleotide sequences, expression data, and serological data. The proteins are useful antigens for vaccines, immunogenic compositions, and / or diagnostics.

Description

This invention relates to antigens from the bacterium Neisseria meningitidis.Neisseria meningitidis is a non-motile, gram negative diplococcus human pathogen. It colonises the pharynx, causing meningitis and, occasionally, septicaemia in the absence of meningitis. It is closely related to N.gonorrhoeae, although one feature that clearly differentiates meningococcus from gonococcus is the presence of a polysaccharide capsule that is present in all pathogenic meningococci.N.meningitidis causes both endemic and epidemic disease. In the United States the attack rate is 0.6-1 per 100,000 persons per year, and it can be much greater during outbreaks (see Lieberman et al. (1996) Safety and Immunogenicity of a Serogroups A / C Neisseria meningitidis Oligosaccharide-Protein Conjugate Vaccine in Young Children. JAMA 275(19):1499-1503; Schuchat et al (1997) Bacterial Meningitis in the United States in 1995. N Engl J Med 337(14):970-976). In developing countries, endemic disease rates are much hi...

Claims

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

Application Information

Patent Timeline
no application Login to View More
IPC IPC(8): C07K14/22C07K14/195A61K39/00G01N33/569A61K31/711A61K38/00A61K39/02A61K39/095A61K39/395A61K48/00A61P31/04C07H21/04C07K16/12C12N1/21C12N15/09C12N15/31C12Q1/68
CPCC07K14/22A61K39/00A61P31/04
Inventor SCARLATO, VINCENZOMASIGNANI, VEGARAPPUOLI, RINOPIZZA, MARIAGRAZIAGRANDI, GUIDO
Owner NOVARTIS AG
Who we serve
  • R&D Engineer
  • R&D Manager
  • IP Professional
Why Eureka
  • Industry Leading Data Capabilities
  • Powerful AI technology
  • Patent DNA Extraction
Social media
Eureka Blog
Learn More
PatSnap group products