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Isothermal amplification method for detecting cry1Ac-transfected sugarcane

A constant temperature amplification and sugarcane technology, applied in the biological field, can solve the problems of expensive and low template purity requirements, and achieve the effects of high specificity, intuitive and convenient results, and simple equipment

Inactive Publication Date: 2013-03-13
FUJIAN AGRI & FORESTRY UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

The nucleic acid level detection methods mainly include PCR method, Southern hybridization and dot blot method, etc. Among them, PCR method is widely used because of its mature technology, rapid amplification, strong specificity, high sensitivity, and low requirement for template purity. , which is also the preferred technology of the transgenic detection laboratories of the Ministry of Agriculture in my country. However, conventional PCR detection methods require expensive PCR amplification instruments in the target sequence amplification process, and expensive gel scanning imaging systems are required for the detection and judgment of amplified products. The picture is collected, and the embedded chromogenic agent EB commonly used in electrophoresis detection is a carcinogen, etc., which has certain limitations for rapid detection and detection at the grassroots level such as test stations.

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  • Isothermal amplification method for detecting cry1Ac-transfected sugarcane
  • Isothermal amplification method for detecting cry1Ac-transfected sugarcane

Examples

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Effect test

Embodiment 1

[0019] Example 1: a detection switch cry1Ac The constant temperature amplification method of gene sugarcane comprises the following steps:

[0020] 1. Extraction of Sugarcane Genomic DNA

[0021] (1) Wipe and disinfect the young leaves of the transgenic sugarcane clone 16K-2 (sugarcane genotype: Xintaitang No. 22) to be tested with ethanol with a volume ratio of 75%;

[0022] (2) Put the sterilized leaves into a sterilized and pre-cooled mortar, add liquid nitrogen and fully grind them into young leaf powder;

[0023] (3) Take 0.5 g young leaf powder and put it into a 2 mL centrifuge tube A, add 800 μL 65°C preheated CTAB extract and 100 μL absolute ethanol, shake and mix well, and incubate at 65°C for 30 min. Centrifuge for 10 min;

[0024](4) Take 800 μL of the supernatant in centrifuge tube B, add an equal volume of phenol, chloroform and isoamyl alcohol solution, mix well, centrifuge for 5 min, take 700 μL of the supernatant in centrifuge tube C, add an equal volu...

Embodiment 2

[0031] Example 2: a detection switch cry1Ac The constant temperature amplification method of gene sugarcane comprises the following steps:

[0032] 1. Extraction of sugarcane genomic DNA: select transgenic DNA in this embodiment cry1Ac The young leaves of transgenic sugarcane clone a-2 in the intermediate test base of genetic sugarcane (sugarcane genotype: Funong 95-1702) were used as the sample to be tested, and the extraction method and steps were the same as in Example 1;

[0033] 2. Establishment of constant temperature amplification system: such as figure 2 As shown, set sterile water control 1, recipient sugarcane non-transgenic control 2, positive plasmid control 3, transgenic cry1Ac Genetic sugarcane positive control 4 (i.e. the sample confirmed as transgenic sugarcane code 19a-1 by real-time PCR and Southern Bloting), sample 5 to be tested, and a total of 5 templates were subjected to constant temperature amplification; the amplification system included 24.0 μL o...

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Abstract

The invention relates to an isothermal amplification method for detecting cry1Ac-transfected sugarcane. The method comprises the steps of extracting sugarcane template DNA (Deoxyribonucleic Acid), establishing an isothermal amplification system and identifying an isothermal amplification product. According to the isothermal amplification method for detecting the cry1Ac-transfected sugarcane, four specific primers are designed aiming at base sequences of an exogenous target gene cry1Ac of stem-borer-resistant transgenic sugarcane, and a chain-displacement amplification reaction is carried out under the action of polymerase Bst, so that the specificity is high; meanwhile, the amplification reaction can be completed by only a water bath kettle and a normal-temperature low-speed centrifuge capable of completing instant centrifugation, so that instruments and equipment required are simple, the amplification cost is relatively lower compared with that of the conventional PCR (Polymerase Chain Reaction) technology, which needs a gel scanning system and a PCR (or real-time PCR) instrument, which are expensive, and the like, the amplification time is short, the amplification efficiency is high, and the result viewing is visual and convenient due to visual color reaction; and after the system is established, extracted DNA of a sugarcane genome directly serves as a template, so that the method is applicable to the cry1Ac-transfected sugarcane screening of laboratories and fields and the detection and tracking of cry1Ac ingredients and has the advantages of low cost, rapidness, sensitivity, simplicity and accuracy.

Description

technical field [0001] The invention relates to a method for detecting a plant transgene, in particular to a method for detecting a transgene cry1Ac The invention relates to a constant temperature amplification method of genetic sugarcane, which belongs to the field of biotechnology. Background technique [0002] Sugarcane borer, belonging to the order Lepidoptera of Insecta, is a common and serious type of borer pest that harms sugarcane. There are many kinds of borers, there are 65 kinds of sugarcane borers in the world, and five kinds are common in my country, namely the barborer ( Chilo venosatus ), two point borer ( C. infuscatellus ) and white borer ( Scirpopophaga excerpalis ); the yellow borer ( Aryroploce schistaceana ); S. inferens ). Sugarcane is originally produced in the tropics. After domestication, it is mainly planted in Guangxi, Yunnan, Fujian and other places in my country. Its processed product sucrose accounts for about 92% of my country's tota...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68
Inventor 许莉萍郭晋隆周定港阙友雄林庆良陈如凯高世武
Owner FUJIAN AGRI & FORESTRY UNIV
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