Antigen epitope III of neutrality B cell of chicken IBDV VP2 protein and application thereof
An antigenic epitope, B cell technology, applied in the direction of viral peptides, peptide sources, peptides, etc., can solve the problem that the shortest amino acid sequence of the antigenic epitope cannot be finally determined, and the antigenic epitope cannot be distinguished.
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Embodiment 1
[0026] Example 1: Gene Cloning of Neutralizing B Cell Antigen Epitope Fragment of Chicken Infectious Bursal Disease Virus IBDV VP2 Protein:
[0027] SPF eggs were incubated until 11 days old, chicken embryos were taken to prepare chicken embryo fibroblasts, inoculated with IBDV-H4 strain virus, cultured at 37°C for 96 hours, and the virus was collected. The virus was separated by ultracentrifugation and 40-60% sucrose density gradient centrifugation to obtain virus particles. The virus total RNA was extracted by TRIZOL method, and the genomic RNA was treated with proteinase K to degrade the double-stranded RNA molecule, which was used as a template to amplify the IBDV A fragment gene by RT-PCR. Recover and purify the PCR product, connect it with the pGEM-T vector, transform Escherichia coli, and construct the A segment gene clone.
[0028] A series of primers for overlapping expression of viral proteins were designed according to the structural characteristics and antigenicit...
Embodiment 2
[0030] Example 2: Fmoc solid-phase peptide synthesis method overlapping synthesis of a series of VP2 antigen peptide fragments and Dot-ELISA screening:
[0031] According to the indirect ELISA monoclonal antibody reaction spectrum of prokaryotic expression of VP2 and overlapping expression of VP2 antigen fragments, and the sequence of VP2 neutralizing antibody site screened by phage peptide library technology, the preliminary sequence of the overlapping synthetic polypeptide was determined. And apply the Chou and Fasman algorithm to analyze the secondary structure characteristics, hydrophilicity, antigenicity, surface accessibility and other characteristics of these polypeptide fragments by computer, and design the sequence of the synthetic polypeptide. And use the peptide program to analyze the difficulty of synthesis, design the peptide synthesis program, and use the peptide synthesizer to synthesize the peptide sequence by combining automatic synthesis and manual synthesis. ...
Embodiment 3
[0033] Example 3: Synthesis of Neutralizing B Cell Antigen Epitope of Chicken Infectious Bursal Disease Virus IBDV VP2 Protein:
[0034] According to the amino acid sequence of the neutralizing B cell epitope of VP2 protein, the solid-phase peptide synthesis technology is applied, and the automatic peptide synthesizer or artificial peptide synthesis method is adopted. The solid-phase resin adopts Fmoc-protected amino acid Wang resin or other resins. After the resin is swollen with DMF and piperidine is de-Fmoc-protected, Fmoc-protected amino acids are added according to the amino acid sequence order, and the acylation reaction is carried out in the presence of HBTU. After the acylation reaction is completed, after washing, the second Fmoc-amino acid is added for acylation reaction and washed. Such a cycle starts from the C-terminus of the polypeptide sequence to the N-terminus, and a complete polypeptide chain is synthesized in sequence. After the synthesis is completed, sele...
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