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Combinations of multiple genetic single nucleotide polymorphism sites related to individualized medication of statins and application thereof

A single nucleotide polymorphism and statin technology, which is applied in the determination/testing of microorganisms, biochemical equipment and methods, etc., can solve the inability to comprehensively guide the individualized medication of statins, and reduce the sensitivity of LDL-C pharmacological effects. Response susceptibility testing and assessment, failure to draw, etc.

Inactive Publication Date: 2017-07-28
张培祥 +1
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  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

In recent years, researchers at home and abroad have developed various detection methods and prediction and evaluation models based on the results of the above-mentioned genomics research. To establish a detection device and evaluation model that can predict the risk of coronary heart disease, but this device and model have no effect on the benefits of statin drug intervention, the sensitivity of the pharmacological effect of lowering LDL-C, and the susceptibility to adverse reactions. Genetic factors are detected and evaluated, so it is impossible to guide the individualized drug use of statins [see Chinese patent: Gu Dongfeng et al., "Single Nucleotide Polymorphism Site Combination of Multiple Genes Related to Coronary Heart Disease and Its Application" CN102762954B (2012 )]; Shiffman et al. from Celera Corporation of the United States identified loci associated with the risk of coronary heart disease and stroke from large-scale genomics studies, and these loci are also associated with statin drug intervention to reduce the risk of cardiovascular and cerebrovascular diseases Response is associated, but this technology does not specifically involve gene loci associated with statin pharmacological effects (LDL-C lowering effect) sensitivity or adverse reaction susceptibility, and it is impossible to fine-tune drug dosage or adverse reaction management and control, and cannot Realize individualized drug use of statin [see US patent: Shiffman et al. "Genetic polymorphisms associated with cardiovascular disease, methods of detection and uses thereof" US8216786B2 (2008); or US patent application "Genetic polymorphisms associated with statin response and cardiovascular disease methods of detection and uses thereof”US 20140235605 A1(2010)]; Schaefer et al. in the United States focused on the dose adjustment of statins, focusing on the role of the gene loci SLCO1B1 and ApoE in the pharmacological effects of statins, that is, the reduction of LDL-C response, but There is no systematic detection and evaluation of the genetic factors of individual coronary heart disease risk and intervention benefits [see US patent: Schaefer et al., "Composition and methods for treating and preventing coronary heart disease" US 8765377 (2011)]; while British Link et al. Just studied the relationship between the SLCO1B1 gene polymorphism and the risk of statin-induced skeletal myolysis [see Chinese patent application Link et al., "Diagnostic methods" CN 102016073 A(2008)]
[0011] In short, the various technologies currently emerging fail to integrate the individual's risk of coronary heart disease and the benefits of statin drug intervention, the sensitivity of pharmacological effects (lowering LDL-C), and the susceptibility to adverse reactions and other genetic factors and research results. Comprehensive analysis and induction failed to draw a panorama of the single nucleotide sites of genes significantly associated with the risk of coronary heart disease, the benefits of statin intervention, the sensitivity of pharmacological effects, and the susceptibility to adverse reactions in the individual genome, and it was impossible to provide comprehensive guidance Personalized statin medication; the lack of this technology also leads to a very low accuracy rate of statin drugs in clinical practice. The latest analysis shows that the accuracy rate of statin medication in the United States is only 5% [see literature Schork, "Personalized medicine: Time for one- person trial”Nature 520:609-611], which not only causes a huge waste of resources, but also may bring new risks such as statin-induced skeletal muscle lysis or new-onset type 2 diabetes to patients

Method used

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  • Combinations of multiple genetic single nucleotide polymorphism sites related to individualized medication of statins and application thereof
  • Combinations of multiple genetic single nucleotide polymorphism sites related to individualized medication of statins and application thereof
  • Combinations of multiple genetic single nucleotide polymorphism sites related to individualized medication of statins and application thereof

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0086] Example 1. Selection of a combination of multiple gene SNPs significantly associated with coronary heart disease and its application in preparing a module for detecting and evaluating an individual's disease risk and statin intervention benefit.

[0087] 1. Study population: 310 control samples and 200 patients with coronary heart disease were selected from the Chinese Han population (Hah Chinese). According to the principle of informed consent, fasting blood was collected and put into an anticoagulation tube, and the age, gender, height, and weight were collected. , blood pressure level, blood lipid level, blood sugar, smoking, drinking and disease history and other related information, as follows:

[0088] Inclusion criteria for coronary heart disease samples: coronary heart disease cases included patients with angina pectoris and patients with myocardial infarction. The selected diagnostic criteria for angina pectoris cases were more than 70% stenosis of the main cor...

Embodiment 2

[0123] Example 2. The sensitivity of the LDL-C lowering effect of statins is significantly associated with the selection of a combination of multiple gene single nucleotide polymorphism sites (pharmacological action sensitive gene sites) and their use in the preparation of detection and evaluation 个体的药理作用敏感性和剂量调整模块中的应用:

[0124] 1.研究对象是上述实施例一中的通过检测和评估个体的疾病风险和干预收益模块处理而需要他汀类药物干预的414位个体,包括200例冠心病患者和214对照样本;对这些个体进行他汀类药物的7个药理作用的敏感基因位点的等位基因分型检测和评估,据此进行进一步分层调整他汀类药物的使用剂量。

[0125] 2.检测与他汀类药物降低LDL-C效应的敏感性呈显著关联的多个基因单核苷酸多态性位点(药理作用敏感基因位点)的等位基因分型,所述7个他汀类药物药理作用敏感基因位点的参见表8。

[0126] 采用实施例一中的所述的Taqman探针法检测上述200例冠心病患者和214例对照样本中的7个他汀类药物药理作用敏感基因位点等位基因分型。实验结果表明所述的7个药理作用敏感基因位点在中国汉族人中的频率2.0%到99.2%。

[0127] 3.对上述他汀类药物药理作用敏感基因位点组合的检测结果进行分析,计算待测个体的他汀类药物遗传降脂效应评分(Genetic Reduction Percent in LDL-C withStatin,GRPL),GRPL=∑N k ×RPL k , where RPL K 指待测个体携带的第k个药理作用敏感基因位点所影响他汀类药物降低LDL-C的效应值,N k 指待测个体所携带的第k个药理敏感位点等位基因的数目(杂合子为1,纯合子为2)。

[0128] Analysis results see Figure 4 和表8,上述414个中国人群的他汀类药物遗传降脂效应评分(...

Embodiment 3

[0134] Example 3. Selection of a combination of multiple gene single nucleotide polymorphism loci (adverse reaction susceptibility gene loci) significantly associated with adverse reactions of statins and their use in the preparation, detection and evaluation of statins Application of susceptibility to adverse reactions and management controls:

[0135] 1. Research subjects: 414 individuals who need statin intervention through the detection and assessment of individual disease risk and intervention benefit module processing in the above embodiment 1, including 200 patients with coronary heart disease and 214 control samples.

[0136] 2. Detection of allele typing of susceptibility loci for statin adverse reactions: the two susceptibility loci for statin adverse reactions described in this specific example are SLCO1B1 rs4149056-C and HMGCR rs12916-T , see Table 10.

[0137] Table 10. Statins ADR susceptibility loci and their relative risk effect size (ADR)

[0138]

[0139...

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Abstract

The invention provides combinations of multiple genetic single nucleotide polymorphism sites related to individualized medication of statins and application thereof. The combinations specifically comprise combinations of multiple genetic single nucleotide polymorphism sites respectively related to individual risks of coronary heart diseases, individual sensitivity to pharmacological action of statins on lowering of cholesterol (LDL-C) and individual susceptibility to adverse reaction of statins. The invention also provides a detection method directed at the combinations of the single nucleotide polymorphism sites and application of the combinations to construction of three-dimensional detection apparatuses and assessment and treatment apparatuses used for predicating and assessing individual risks of coronary heart diseases and statin intervention earnings, sensitivity to pharmacological action and dosage adjustment, and susceptibility to adverse reaction and management and control.

Description

technical field [0001] The invention relates to a combination of multiple gene single nucleotide polymorphism sites related to the individualized medication of statins and its application, specifically including the risk of coronary heart disease, the statins lowering cholesterol (LDL- C) combination of multiple gene single nucleotide polymorphism sites associated with three aspects of pharmacological action sensitivity and susceptibility to adverse reactions of statins and their application; the present invention also relates to the single nucleotide polymorphism for said single nucleotide Detection method of acid polymorphism site combination and its preparation for predicting and evaluating individual risk of coronary heart disease and benefit of statin drug intervention, pharmacological sensitivity and dose adjustment, susceptibility to adverse reactions and management control "three-dimensional" ” application in detection devices and evaluation processing devices Backgr...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68
CPCC12Q1/6883C12Q2600/106C12Q2600/156
Inventor 张培祥王莉莉
Owner 张培祥
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