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Staphylococcus aureus polynucleotides and polypeptides

a technology of staphylococcus aureus and polynucleotides, which is applied in the direction of peptides, antibody medical ingredients, peptide/protein ingredients, etc., can solve the problems of mixed colonization at the injury site, local or general physiological dysfunction, and destruction of granulation tissu

Inactive Publication Date: 2005-05-19
HUMAN GENOME SCI INC
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, they generally compromise physical and immune barriers to infection, cause loss of fluid and electrolytes and result in local or general physiological dysfunction.
After cooling, contact with viable bacteria results in mixed colonization at the injury site.
It can destroy granulation tissue and produce severe septicemia.
Cellulitis can lead to systemic infection.
It causes necrosis and treatment is limited to excision of the necrotic tissue.
The condition often is fatal.
Typically such infections are limited to the surface of the eye, and may occasionally penetrate the surface with more severe consequences.
Ingestion of the toxin, in sufficient quantities, typically results in severe vomiting, but not diarrhea.
Such infections often are resolved by normal host response mechanisms, but they also can develop into severe internal infections.
Infection of such wound thus poses a grave risk to the patient.
Invasion of surgical wound can lead to severe S. aureus septicemia.
Shedding of the outer layer of skin generally reveals normal skin below, but fluid lost in the process can produce severe injury in young children if it is not treated properly.
The disease can be caused by S. aureus infection at any site, but it is too often erroneously viewed exclusively as a disease solely of women who use tampons.
The disease involves toxemia and septicemia, and can be fatal.
Prior to the introduction of penicillin the prognosis for patients seriously infected with S. aureus was unfavorable.
Methicillian-resistant S. aureus (MRSA) has become one of the most important nosocomial pathogens worldwide and poses serious infection control problems.
Recent reports that transfer of vancomycin resistance genes from enterococci to S. aureus has been observed in the laboratory sustain the fear that MRSA might become resistant against vancomycin, too, a situation generally considered to result in a public health disaster.

Method used

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Examples

Experimental program
Comparison scheme
Effect test

example 1

Isolation of a Selected DNA Clone from the Deposited Sample

[0387] Three approaches can be used to isolate a S. aureus clone comprising a polynucleotide of the present invention from any S. aureus genomic DNA library. The S. aureus strain ISP3 has been deposited as a convienent source for obtaining a S. aureus strain although a wide varity of strains S. aureus strains can be used which are known in the art.

[0388]S. aureus genomic DNA is prepared using the following method. A 20 ml overnight bacterial culture grown in a rich medium (e.g., Trypticase Soy Broth, Brain Heart Infusion broth or Super broth), pelleted, washed two times with TES (30 mM Tris-pH 8.0, 25 mM EDTA, 50 mM NaCl), and resuspended in 5 ml high salt TES (2.5M NaCl). Lysostaphin is added to final concentration of approx 50 ug / ml and the mixture is rotated slowly 1 hour at 37° C. to make protoplast cells. The solution is then placed in incubator (or place in a shaking water bath) and warmed to 55° C. Five hundred micr...

example 2 (

Example 2(d)

Cloning and Expression of S. aureus in Other Bacteria

[0429]S. aureus polypeptides can also be produced in: S. aureus using the methods of S. Skinner et al., (1988) Mol. Microbiol. 2:289-297 or J. I. Moreno (1996) Protein Expr. Purif. 8(3):332-340; Lactobacillus using the methods of C. Rush et al., 1997 Appl. Microbiol. Biotechnol. 47(5):537-542; or in Bacillus subtilis using the methods Chang et al., U.S. Pat. No. 4,952,508.

example 3

Cloning and Expression in COS Cells

[0430] A S. aureus expression plasmid is made by cloning a portion of the DNA encoding a S. aureus polypeptide into the expression vector pDNAI / Amp or pDNAIII (which can be obtained from Invitrogen, Inc.). The expression vector pDNAI / amp contains: (1) an E. coli origin of replication effective for propagation in E. coli and other prokaryotic cells; (2) an ampicillin resistance gene for selection of plasmid-containing prokaryotic cells; (3) an SV40 origin of replication for propagation in eukaryotic cells; (4) a CMV promoter, a polylinker, an SV40 intron; (5) several codons encoding a hemagglutinin fragment (i.e., an “HA” tag to facilitate purification) followed by a termination codon and polyadenylation signal arranged so that a DNA can be conveniently placed under expression control of the CMV promoter and operably linked to the SV40 intron and the polyadenylation signal by means of restriction sites in the polylinker. The HA tag corresponds to a...

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Abstract

The present invention relates to novel genes from S. aureus and the polypeptides they encode. Also provided are vectors, host cells, antibodies and recombinant methods for producing the same. The invention further relates to screening methods for identifying agonists and antagonists of S. aureus polypeptide activity. The invention additionally relates to diagnostic methods for detecting Staphylococcus nucleic acids, polypeptides and antibodies in a biological sample. The present invention further relates to novel vaccines for the prevention or attenuation of infection by Staphylococcus.

Description

CROSS-REFERENCE TO RELATED APPLICATIONS [0001] The present application is a divisional of U.S. application Ser. No. 09 / 925,637, filed Aug. 10, 2001, which is a continuation-in-part of U.S. application Ser. No. 08 / 956,171, filed Oct. 20, 1997 (now U.S. Pat. No. 6,593,114, issued Jul. 15, 2003), and U.S. application Ser. No. 08 / 781,986, filed Jan. 3, 1997 (now U.S. Pat. No. 6,737,248, issued May 18, 2004), each of which claims benefit under 35 U.S.C. § 119(e) to U.S. Provisional Application No. 60 / 009,861, filed Jan. 5, 1996; said U.S. application Ser. No. 09 / 925,637 is also a continuation-in-part of International Application No. PCT / US00 / 23773, filed Aug. 31, 2000, which claims benefit under 35 U.S.C. § 119(e) of U.S. Provisional Application No. 60 / 151,933, filed Sep. 1, 1999. Each of the above-listed applications are hereby incorporated by reference in their entirety.FIELD OF THE INVENTION [0002] The present invention relates to novel Staphylococcus aureus genes (S. aureus) nucleic ...

Claims

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Application Information

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Patent Type & Authority Applications(United States)
IPC IPC(8): A61K38/00A61K39/00C07K14/31C12N15/10C12N15/52C12Q1/68
CPCA61K38/00A61K39/00C12Q1/689C12N15/1093C12N15/52C07K14/31
Inventor CHOI, GIL
Owner HUMAN GENOME SCI INC
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