LAMP (Loop-Mediated Isothermal Amplification) primer group, micro-fluidic chip and kit for detecting reproductive tract pathogenic microorganisms
A microfluidic chip, a technology of pathogenic microorganisms, applied in the field of reproductive tract infection detection, can solve the problems of being infected, difficult to detect bacteria, and high requirements, and achieve the effects of rapid and accurate detection, short detection time, and high sensitivity
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Embodiment 1
[0046] Design and preparation of LAMP primer set for detection of reproductive tract pathogenic microorganisms
[0047] Housekeeping genes (HKG) are a general term for a class of genes that are expressed stably in different tissues and are less disturbed by the environment. Housekeeping gene detection has been widely used in the field of species evolution analysis, identification and safety monitoring of complex biological samples. The glucokinase gene (glucokinase, glk) is one of the housekeeping genes of Streptococcus agalactiae. Studies have determined the variable nucleotide sites of the glk gene in 152 Streptococcus agalactiae strains, and its percentage is 1.5%. Ubiquitous and conserved in Streptococcus, it can be used as a specific gene for bacterial identification. The bacterial gene gyrA encodes the A subunit of DNA gyrase (DNAgyrase), which plays an important role in DNA replication, transcription and repair. The GyrA gene exists in the form of a single copy in mos...
Embodiment 2
[0054] Preparation and use of a kit for detecting pathogenic microorganisms in the reproductive tract
[0055] The kit includes microfluidic chip and constant temperature amplification MIX.
[0056] 2.1 Preparation of reagents for detecting pathogenic microorganisms in the reproductive tract
[0057] The reagents for detecting pathogenic microorganisms in the reproductive tract provided by the present invention are composed as follows:
[0058] 35μL isothermal amplification MIX, 35μL template, 70μL in total. Among them, the constant temperature amplification MIX is provided by Baikangxin, including Isothermal Amplification Buffer, Betaine, BSA solution, MgSO 4 , 20×EvaGreen, dATP, dTTP, dCTP, dGTP, Bst2.0 WarmStart DNA polymerase, UNGase, dUTP. The concentration of each primer group in the reaction system is shown in Table 2.
[0059] Table 2 Final concentration of primers in LAMP reaction system
[0060]
[0061] 2.2 Microfluidic reaction chip loaded with primer set ...
Embodiment 3
[0080] Specificity of Detection Loop Mediated Isothermal Amplification Microfluidic Chip
[0081] The 10 bacteria related to reproductive tract infection used in the specificity experiment were: Escherichia coli, Enterococcus faecium, Staphylococcus epidermidis, Streptococcus dysgalactiae, Klebsiella pneumoniae, Bacteroides fragilis, Proteus mirabilis, Enterobacter cloacae , Staphylococcus aureus, and Streptococcus parahaemolyticus all come from the clinical isolates of the Third People's Hospital of Chengdu, and use the Baikangxin nucleic acid rapid extraction kit to extract DNA for amplification detection. The extraction method is the same as 2.3. 1. Take 2 μL and 35 μL of DNA from each of the above ten species of bacteria to amplify MIX, make up the system to 70 μL with DEPC water, mix well, inject the chip into the supporting instrument for detection according to the operation in 2.3.3.
[0082] The test results showed that none of the ten kinds of pathogenic bacteria rel...
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