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HER2 gene detection kit and application thereof

A kit and gene technology, which is applied in the field of biomedicine, can solve the problems that are difficult to meet the stability and precision of clinical HER2 detection, the ratio relationship between the concentration of the target gene and the reference gene is difficult to control, and the error range of the standard product concentration is large, so as to reduce the The effect of detection cost, high repeatability and easy operation

Inactive Publication Date: 2019-06-28
SHANGHAI NAT ENG RES CENT OF ANTIBODY MEDICINE
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

For example, Roche’s HER2 gene amplification detection kit is based on the principle of comparing the copy number difference based on the Ct value difference between the HER2 gene and the reference gene amplification reaction (ΔΔCt after correction of the ΔCt of the reference sample), but different PCR reaction systems There are differences in amplification efficiency and PCR equipment wells, and this method is difficult to meet the stability and precision requirements of clinical HER2 detection
In addition, Thermo Fisher uses a series of target genes and reference genes with different concentration gradients to draw a standard curve, and calculates the copy numbers of the target gene and reference gene in the sample relative to their respective standards, so as to obtain the quantitative copy number of the sample gene, but Due to the high difficulty of absolute quantification of standard products and the large error range of standard product concentration, it is difficult to control the concentration ratio relationship between the target gene and the reference gene, which will cause large errors in the experimental results.

Method used

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  • HER2 gene detection kit and application thereof
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  • HER2 gene detection kit and application thereof

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0036] Example 1 Human Cell Line Genomic DNA Extraction

[0037] The genomic DNA used for the construction of the plasmid standard product of the present invention comes from the K562 cell line cultured in vitro (purchased from ATCC).

[0038] Taking Qiagen's Allprep DNA mini KIT as an example to introduce the DNA extraction steps of cell lines:

[0039] (1) Add 450 μL Buffer RLT Plus, and count the number of cells.

[0040] (2) After mixing, transfer to the Allprep DNA adsorption column (placed in a 2mL collection tube), and centrifuge at the highest speed for 35 seconds.

[0041] (3) Replace with a new 2mL collection tube, add 500μL Buffer AW1, centrifuge at the highest speed for 15 seconds, and discard the liquid in the collection tube.

[0042] (4) Add 500 μL Buffer AW2 and centrifuge at the highest speed for 3 minutes.

[0043] (5) Change to a new collection tube (1.5mL with a cover), add 200μL Buffer EB, and place at room temperature for 1 minute. The DNA was eluted ...

Embodiment 2

[0044] Example 2 Human Paraffin Embedded Tissue Genomic DNA Extraction

[0045] The samples tested in the present invention are paraffin-embedded human breast cancer tissues (from Changhai Hospital Affiliated to Second Military Medical University).

[0046] Taking Qiagen's GeneRead DNA FFPE KIT as an example to introduce the sample DNA extraction steps:

[0047] (1) Scrape the tissue on the paraffin section into a 2mL centrifuge tube.

[0048] (2) Add 160 μL of deparaffinization solution, vortex for 10 seconds, centrifuge briefly, and incubate at 50°C for 5 minutes.

[0049] (3) Add freshly prepared 100 μL incubation buffer / proteinase K solution (prepared from 55 μL RNase-free water, 25 μL FTB buffer, and 20 μL proteinase K) after restoring equilibrium at room temperature. After vortex centrifugation, incubate at 50°C for 1 hour, and then directly transfer to 80°C for further incubation for 1 hour.

[0050] (4) After simple centrifugation, take the clear bottom liquid, put ...

Embodiment 3

[0059] Embodiment 3 prepares special standard

[0060] 1. Preparation of the carrier

[0061] The TA cloning vector pMD18-T was purchased from Promega Company.

[0062] 2. Preparation for inserting fragments

[0063] 2.1. Preparation of target gene and reference gene amplification region

[0064] The PCR method was used to prepare gene fragments of the target gene and the reference gene. The PCR template was the cellular genomic DNA extracted in Example 1, and the reaction system was shown in Table 1 (PCR reaction system 1).

[0065] Table 1. Reaction system for preparing target gene fragments by PCR amplification (60 μL / tube, PCR reaction system 1)

[0066]

[0067] The HER2 gene fragment (SEQ ID NO: 1) can be prepared by adding the outer forward and reverse primer sequences of HER2 to the PCR amplification system; the FAS gene fragment (SEQ ID NO: 1) can be prepared by adding the outer forward and reverse primer sequences of FAS to the amplification system. IDNO:2), t...

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PUM

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Abstract

The invention discloses an HER2 gene detection kit and application thereof and particularly discloses a quantitative HER2 gene detection kit. The kit comprises a PCR reaction buffer solution, a Taq enzyme, a dNTP mixed solution, a standard substance with a gene segment of HER2 mesh and a Fas reference gene segment, a target gene specific primer and a fluorescence probe, a reference gene specific primer and a fluorescence probe and negative control and positive control. A detection method and the detection kit have the advantages that the kit is convenient to use and high in detection efficiency, and the method and the kit have important significance on diagnosis of the HER2 positive breast cancer and research and development, quality control and clinical application of drugs for resistingthe diseases.

Description

technical field [0001] The invention belongs to the technical field of biomedicine, and in particular relates to a HER2 gene detection kit and its application. Background technique [0002] The human epidermal growth factor receptor-2 (HER2) gene, c-erbB-2 gene, is located on chromosome 17q12-21.32 and encodes a transmembrane receptor-like protein with a relative molecular mass of 185,000. Has tyrosine kinase activity. Under normal human conditions, HER2 is a single-copy gene, but in breast cancer and gastric cancer tumor cells, chromosomal heterogeneity often occurs, such as an increase in the number of chromosome 17, and more commonly, the HER2 gene on chromosome 17 and its The downstream 300-1000M DNA sequence is inserted into other chromosomes through gene rearrangement, which leads to an increase in the copy number of HER2 gene, which in turn leads to the overexpression of HER2 protein on the surface of tumor cells. [0003] Correct detection and evaluation of HER2 pr...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/6886C12Q1/6851
Inventor 黎健荣董玮婷胡湘丽路玲玉耿妍
Owner SHANGHAI NAT ENG RES CENT OF ANTIBODY MEDICINE
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