RYR2 (ryanodine receptor 2) gene as molecular marker to affect feed conversion rate of sheep and application of molecular marker
A feed conversion rate and molecular marker technology, applied in the field of molecular marker preparation, can solve the problems of less research and achieve the effects of low-cost operation method, retention accuracy and cost reduction
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Embodiment 1
[0036] Embodiment 1 Amplification of RYR2 gene
[0037] (1) Primer design
[0038] Using the sheep RYR2 gene DNA (GenBank accession number: NC_040276.1) as a template, a pair of primers M-F and M-R were designed using Primer5.0 software. The primer sequences are as follows
[0039] RYR2:
[0040] M-F: 5'-GTCCCTCTCAGGAGAACACGG-3' (SEQ ID NO: 2),
[0041] M-R: 5'-CTGGTAAGTGAGCCACAAGC-3' (SEQ ID NO: 3).
[0042] (2) Amplification and sequencing of RYR2 gene
[0043] The total volume of the PCR reaction is 25 μL, including 1 μL of DNA template, 12.4 μL of 2×PCR Master Mix, 0.8 μL of upstream primers, 0.8 μL of downstream primers, and 10 μL of ddH2O. The PCR amplification program was: pre-denaturation at 94°C for 3 min, denaturation at 94°C for 30 s, annealing at 54.5°C for 30 s, extension at 72°C for 30 s, 35 cycles, and finally extension at 72°C for 10 min. The PCR reaction product was detected by 1.5% agarose gel electrophoresis, and the results showed that a 387bp specific...
Embodiment 2
[0046] The establishment of embodiment 2 genotyping detection method
[0047] (1) Primer sequence design
[0048] A pair of KASPar primers are designed for the A / C polymorphic site of the amplified fragment in Example 1, so as to be used for the specific detection of the polymorphic site, and the nucleotide sequence of the KASPar primer pair is:
[0049] Forward primer A1 for detection of AlleleA:
[0050] GAAGGTGACCAAGTTCATGCTTCTGAAATAAAATATGGAGACTCGGTA (SEQ ID NO: 4);
[0051] Forward primer A2 for detection of AlleleC:
[0052] GAAGGTCGGAGTCAACGGATTCTGAAATAAAATATGGAGACTCGGTC (SEQ ID NO: 5);
[0053] Universal reverse primer C: GTAAGTGAGCCACAAGCCTGTATTG (SEQ ID NO: 6).
[0054] The above primers were synthesized by entrusting Beijing Sangong Bioengineering Co., Ltd., and the primers of each group in the KASPar primer pair were diluted to 10 μmol / L, and mixed according to the volume ratio of 12:12:30 (primer A1: primer A2: primer C) Evenly reserve.
[0055] (2) DNA qual...
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