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Method for high-effective construction of T-carrier based on polymerase chain reaction

A carrier and high-efficiency technology, applied in the direction of using vectors to introduce foreign genetic material, recombinant DNA technology, etc., can solve the problems of high non-recombination background of enzymes, low enzyme digestion efficiency, low cloning efficiency, etc., and achieve simple and easy experimental steps, cloning The effect of high efficiency and simple method

Inactive Publication Date: 2008-05-14
TIANJIN MEDICAL UNIV
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AI Technical Summary

Problems solved by technology

[0005] 1. High non-recombinant background and low cloning efficiency
[0006] The preparation of T vectors by terminal transferase or Taq enzyme is sometimes due to the low efficiency of adding T to the enzyme, and the ends of some vector molecules are not modified at all, resulting in the existence of blunt-ended linear plasmids with no T added at both ends. It is difficult to avoid the loop of the vector itself during the ligation process. Sometimes there is also the problem that the sequences at both ends of the linear plasmid are partially deleted during the T-tailing process
The method of preparing T vectors with specific restriction endonucleases such as XcmI, AhdI and other enzymes also often produces incomplete digestion due to relatively low digestion efficiency, and the problem of excessive non-recombination background in the cloning process
Therefore, the key problem in the construction of T vector is the high non-recombination background caused by the low efficiency of the enzyme, which leads to low cloning efficiency.
[0007] 2. There are limitations of endonucleases
But the premise of adopting this method is that the starting vector itself does not have recognition sites such as XcmI, AhdI (or their isozymes), otherwise mutagenesis must first be carried out to make this site disappear, and the more such sites, The mutagenesis process is more cumbersome, time-consuming and labor-intensive

Method used

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  • Method for high-effective construction of T-carrier based on polymerase chain reaction

Examples

Experimental program
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Effect test

Embodiment 1

[0031] Example 1: Preparation of T vector pUC18-T

[0032] 1. Preparation of plasmid pUC18-V

[0033] According to the sequence of plasmid pUC18, a pair of oligonucleotide sequences were designed as:

[0034] pUC-oligo-s: 5' AATT CGAGCTCGGTACCCGGG GATATC G CCCTCTAGAG-3';

[0035] pUC-oligo-as: 5' TCGA CTCTAGAGGGG C GATATC CCCGGGTACCGAGCTCG-3'.

[0036] The introduced oligonucleotide sequences all contain (1) EcoRI recognition site, marked in italics; (2) EcoRV recognition site, marked with a single line; in addition, the 5' ends of the two oligonucleotides contain EcoRI respectively Cut end "AATT" and SalI cut end "TCGA".

[0037] The oligonucleotide fragments were phosphorylated separately, and the two reaction systems were 20 μL, containing 1U T 4 DNA kinase, 1×T 4 DNA kinase Buffer, pUC-oligo-s or pUC-oligo-as 5μmol / L, ATP final concentration 1mmol / L. After acting at 37°C for 60 minutes, mix the two systems, and inactivate T at 70°C for 10 minutes 4 For D...

Embodiment 2

[0047] Example 2: Efficiency Detection of T Vector pUC18-T

[0048] Use TaqDNA polymerase to amplify the minimal promoter of chemokine receptor CXCR4, and perform ligation reaction between CXCR4 PCR product and pUC18-T vector. The 10 μL ligation system is as follows: 25ng PCR product, 50ng T vector, 3U T 4 DNA ligase, ligated for 16 hours at 16°C. The above-treated ligation product was transformed into JM109 strain. After picking 20 clones and culturing them, the plasmids were extracted and digested with EcoRI (one EcoRI site on each side of the A-T cloning site) to identify the presence or absence of the insert. The results showed that the transformation efficiency of T vector clones was not lower than 5×10 5 cfu / mg DNA, all clones picked contain inserts. The recombinant vectors were named pUC18-T / CXCR4 respectively.

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Abstract

The invention discloses a method for efficiently constructing a T vector based on the PCR method. The main method is to introduce a pair of oligonucleotide fragments containing a specific restriction enzyme site into the starting vector (such as pUC18). The restriction enzyme site is characterized by The corresponding enzyme (such as EcoRV) can produce blunt ends, and the bases before and after the cutting point are T and A, respectively. Then use the enzyme to linearize the starting vector as a PCR template, design primers to generate a single strand through single primer PCR amplification or asymmetric PCR amplification, and then anneal the two single strands to form a T vector. The preparation of the T vector by the method is simple and fast, and the prepared T vector can efficiently clone the PCR product with an "A" tail, and its non-recombination background is almost zero.

Description

technical field [0001] The invention relates to a method for constructing a vector in the field of genetic engineering, in particular to a method for constructing a high-efficiency T vector. Background technique [0002] T vector is a linear vector used for direct cloning of PCR products, and A-T cloning technology has been proved to be extremely valuable for the cloning of PCR products. The principle of this method is that Taq DNA polymerase can be used to add a non-template-dependent dA base to the 3' end of the amplified product. This dA has just paired with the dT at the 3' overhang of the linear T vector for direct high-efficiency connection and Cloning process without restriction endonuclease digestion. [0003] Currently, there are two classic methods for constructing T vectors. The first method is to linearize the plasmid with an endonuclease such as SmaI or EcoRV that produces a blunt end cut point, and then use terminal transferase or Taq enzyme with terminal tra...

Claims

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Application Information

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IPC IPC(8): C12N15/66
Inventor 李晓霞王宝利郭刚张镜宇钟启平訾自强张瑞
Owner TIANJIN MEDICAL UNIV
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