Hematopoietic stem cell gene modification method for targeting hemoglobin HBB mutant gene
A technology of hematopoietic stem cells and hemoglobin, applied in the field of gene modification of hematopoietic stem cells, can solve the problems of expensive medical expenses
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Embodiment 1
[0039] The design of embodiment 1 gRNA
[0040] Design gRNA based on CD41 / 42(-CTTT), the most common HBB mutation in Guangxi, Guangdong, China.
[0041] The normal sequence near the HBB gene exon2 is as follows (as shown in SEQ ID NO.5):
[0042] 5'-tcccaccctt agGCTGCTGG TGGTCTACCC TTGGACCCAG AGGTTCTTTG AGTCCTTTGG-3'.
[0043] The mutation sequence near the HBB gene exon2 is as follows (the italic part is the missing 4bp, CD41 / 42del CTTT type) (as shown in SEQ ID NO.6):
[0044]
[0045] The sequence of the gRNA designed to target the position near HBB exon2 is as follows (the sequence shown is the corresponding DNA sequence) (as shown in SEQ ID NO.7, 8) (using software to design, targeting at 250-500 bp upstream and downstream of the mutation position design):
[0046] gRNA1-20: 5'-GACCACCAGCAGCCUAAGGG-3';
[0047] gRNA2-21: 5'-GCCCAUAACAGCAUCAGGAG-3'.
[0048] Clone the gRNA sequence into the T7 promoter vector pcDNA3.1, transcribe the gRNA by T7 RNA polymerase in vi...
Embodiment
[0056] 100ml of umbilical cord blood or 50-100ml of bone marrow of patients with thalassemia, after mononuclear cells were separated by Ficoll, CD34+ cells were obtained with CD34 magnetic beads (Miltenyi CD34 MultiSort kit), and resuspended in StemSpan basal medium.
[0057] The HDR450bp sequence was cloned into rAAV (recombinant adeno-associated virus) to form rAAV-HDR450bp.
[0058] There are two types of experiments:
[0059] Scheme 1: spCas9-2.0 mRNA transcribed in vitro; gRNA synthesized in vitro; cloning and preparation of rAAV-HDR450bp (recombinant adeno-associated virus) ssDNA containing the repaired HBB CD41 / 42 delCTTT sequence. The above mRNA and gRNA electroporation (electroporation) into CD34+ cells (electroporation in 4mm cuvette, 550V / cm, 38ms). After culturing for 1 day, CD34+ cells were transfected with rAAV-HBB, and the cells were cultured in Stemspan medium (adding 100ng / ml SR1 1.0uM factor 5 of TOPIL6SCF Flt3), counting and adding culture medium every 2 da...
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