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Group B streptococcus fluorescent quantitative PCR detection kit

A fluorescent quantitative and streptococcal technology, applied in the determination/testing of microorganisms, DNA/RNA fragments, biochemical equipment and methods, etc., can solve the problems of urine, feces, human genomic DNA, clotrimazole suppositories, miconazole Suppositories, nystatin ointment, Imodium or compound carrageenate suppositories cannot meet the problems of fast, early diagnosis, accuracy and sensitivity, etc., and achieve the effect of reducing synthesis cost, increasing success rate and strong sensitivity

Inactive Publication Date: 2018-01-09
GUANGZHOU SAGENE BIOTECH
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

(1) Bacterial culture method: Due to the need for bacterial culture, it takes at least 2 days to identify positive, and at least 3 days to identify negative, and the immunological sensitivity of bacterial culture will be affected by the amount of bacteria. If the amount of bacteria is insufficient, it will be difficult GBS was detected positive, so the phenomenon of missed diagnosis in clinical testing occurs from time to time
(2) Immunological method: Although this method has high specificity, its sensitivity is not enough, the detection rate is low, and it cannot meet the requirements of rapid and early diagnosis
However, the existing fluorescent quantitative PCR technology still has shortcomings such as false positives, low accuracy and stability, and low sensitivity, which limits its clinical application.
In addition, when the sample to be tested contains complex components (such as whole blood, mucin, urine, feces, human genomic DNA, clotrimazole suppository, miconazole suppository, nystatin ointment, imodium or compound carrageenan Ester suppositories, etc.), the accuracy and sensitivity of existing kits for GBS detection are often not ideal

Method used

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  • Group B streptococcus fluorescent quantitative PCR detection kit
  • Group B streptococcus fluorescent quantitative PCR detection kit
  • Group B streptococcus fluorescent quantitative PCR detection kit

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0041] 1. Design 4 sets of GBS amplification primer pairs, GBS detection probes, internal reference primer pairs and internal reference probes, the nucleotide sequences are shown in Table 1, and study the detection of complex samples with different primers and probes.

[0042] Table 1 Nucleotide sequences of primers and probes

[0043]

[0044] 2. Prepare 4 kinds of kits, each kit contains only one of the 4 sets of primers and probes A, B, C, and D. Except for the primers and probes, the rest of the components are the same, and kits A, B, and D are obtained respectively. B, C, D.

[0045] The preparation steps of the kit are as follows:

[0046] A fluorescent quantitative PCR detection kit for group B streptococci comprises a set of fluorescent quantitative PCR detection primers and probes for group B streptococcus, DNA extraction solution, PCR reaction solution, positive control solution and negative control solution. Wherein said Group B Streptococcus fluorescent quanti...

Embodiment 2

[0071] Use kit A to detect group B streptococcus in clinical samples, the steps are as follows:

[0072] 1. Extract sample DNA

[0073] 1. Preparation before detection

[0074] Take out the reagents from -20°C 15-30 minutes in advance, thaw the reagents, vortex each component for 20-40s, and briefly centrifuge for 2-6s; prepare a water bath and set the temperature to 100°C.

[0075] 2. Preparation of DNA Extraction Solution

[0076] Recipe for 1mL DNA extraction solution: 1×Tris-EDTA Buffer 990μL+Triton X-100 10μL.

[0077] Mix the above-mentioned 1×Tris-EDTA Buffer and Triton X-100, heat at 30-40°C, and stir magnetically for 15-30 minutes until the glue block is completely dissolved. Among them, Triton X-100 is a very viscous liquid, which should be stirred until it is fully dissolved and mixed evenly, and the preparation should be completed within 1 hour. The obtained DNA extract is a colorless and clear liquid with a pH value of 7.5-8.2 and stored in a refrigerator (2-8...

Embodiment 3

[0109] Specific detection of kit A:

[0110] Select clinical common pathogens Group B Streptococcus, Streptococcus pneumoniae, Streptococcus pyogenes, Streptococcus thermophilus, Streptococcus mutans, Streptococcus pyogenes, Lactobacillus acidophilus, Lactobacillus reuteri, Staphylococcus epidermidis, Escherichia coli Escherichia DH5α, Candida albicans, respectively extract DNA according to the method in Example 2, prepare PCR reaction solution, and detect each bacterial strain respectively according to the detection method of Group B Streptococcus in Example 2, and use Group B Streptococcus Standard strains were used as positive controls.

[0111] The result is as figure 2 As shown, only the standard and clinical strains of group B Streptococcus were positive, indicating that the kit A has high specificity, and the kit A will not cross-react with various common clinical pathogens.

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Abstract

The invention belongs to the technical field of bacteria detection, and more specifically discloses a group B streptococcus fluorescent quantitative PCR detection kit. The group B streptococcus fluorescent quantitative PCR detection kit comprises a group of group B streptococcus fluorescent quantitative PCR detection primers and probes; the primers and probes comprise GBS amplification primer pairGBS-F and GBS-R, GBS detection probe GBS-P, internal reference primer pair beta-actin-F and beta-actin-R, and internal reference probe beta-actin-P; the nucleotide sequences of GBS-F, GBS-R, GBS-P, beta-actin-F, beta-actin-R, and beta-actin-P are represented by SEQ ID NO:1-6 respectively. The group B streptococcus fluorescent quantitative PCR detection kit can be used for detecting GBS in samplewith complex composition, and detecting single copy templates, is wider in linearity range, is capable of avoiding false positive results caused by amplification products pollution, and is high in sensitivity and specificity.

Description

technical field [0001] The invention relates to the technical field of bacterial detection, in particular to a fluorescent quantitative PCR detection kit for group B streptococci. Background technique [0002] Group B streptococcus (group B streptococcus, GBS) is an aerobic Gram-positive streptococcus, which normally resides in the vagina and rectum, and is an opportunistic pathogen. Since the polysaccharides in the cell wall belong to group B in the classification of antigen structure, group B streptococcus is generally used to replace the original name of Streptococcus agalactiae. In the 1970s, GBS has been proved to be one of the main pathogenic bacteria of perinatal mother-infant infection, and it occupies a non-negligible position in perinatal medicine. At the same time, it is also the most common cause of infant sepsis and meningitis. According to statistics, the carrier rate of pregnant women is about 5% to 30%, of which 40% to 70% will be passed to the newborn durin...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68C12Q1/14C12N15/11C12R1/46
Inventor 曾宏彬陈杰
Owner GUANGZHOU SAGENE BIOTECH
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