Molecular marker related to prostate cancer and applications of molecular marker
A technology of molecular markers and prostate cancer, applied in the biological field, can solve problems such as misdiagnosis of disease, misdiagnosis of disease, failure to reach early diagnosis, etc.
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Embodiment 1
[0034] Example 1 High-throughput sequencing screening of differentially expressed genes
[0035] 1. Sampling
[0036]Select 10 cases of fresh prostate cancer tissues and corresponding paracancerous tissues, samples from prostate cancer patients who underwent radical prostatectomy and bilateral pelvic lymph node dissection from October 2012 to December 2015 in Peking Union Medical College Hospital. Under the guidance of the pathologist, the prostate cancer and paracancerous tissues were immediately taken and put into liquid nitrogen, and stored in a -80°C low-temperature refrigerator after serial numbering.
[0037] 2. Total RNA extraction from tissue samples
[0038] use Reagent (invitrogen, Cat. No. 15596-018) was used to extract sample RNA, and the experimental operation was carried out according to the product manual. The specific operation was as follows:
[0039] Collect the samples and freeze them in liquid nitrogen. After taking them out, put the tissue samples into...
Embodiment 2
[0050] Example 2 RT-PCR verification of the expression of LOC100190940 in prostate cancer tissue
[0051] 1. Materials
[0052] 10 prostate cancer patients were selected, and the samples were collected from the prostate cancer patients who underwent radical prostatectomy and bilateral pelvic lymph node dissection from October 2012 to December 2015 in Peking Union Medical College Hospital. Immediately take prostate cancer and paracancerous tissues and put them into liquid nitrogen, and store them in a -80°C low-temperature refrigerator after serial numbering.
[0053] 2. Method
[0054] 2.1 Extract the total RNA from the tissue samples of the subjects, the same as the extraction method in Example 1.
[0055] 2.2 Synthesis of cDNA by reverse transcription
[0056] use III Reverse Transcriptase (invitrogen, Cat. No. 18080-044) was used for cDNA reverse transcription, and the experimental operation was carried out according to the product manual. The specific operation was as...
Embodiment 3
[0076] The preparation of embodiment 3 kits
[0077] Based on the primer set obtained in Example 2, assemble the test kit for detecting prostate cancer according to the present invention, the kit includes a primer pair for specific amplification of LOC100190940 as shown in SEQ ID NO:2 and SEQ ID NO:3 , and the primer pair for specifically amplifying the housekeeping gene (GAPDH) are shown in SEQ ID NO:4 and SEQ ID NO:5; also include SYBR Green polymerase chain reaction system, such as PCR buffer, SYBR Green fluorescent dye, dNTPs . The composition of described PCR buffer is 25mMKCl, 2.5mM MgCl 2 , 200mM (NH 4 ) 2 SO 4 ; Also includes normal prostate tissue cDNA: used as a negative control and detection sample cDNA for quantitative PCR detection, each reaction system uses the same amount as the detection sample cDNA.
[0078] Through the optimization of primer concentration and annealing temperature, the reaction system was finally determined as shown in Table 3:
[0079]...
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