Fluorescence in situ hybridization detection kit for detecting mycobacterium tuberculosis infection
A fluorescence in situ hybridization and detection kit technology, applied in the field of medical detection, can solve the problems of weak specificity, atypical lesions, false negatives, etc., and achieve the effect of sensitive detection
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Embodiment 1
[0028] Example 1 Preparation of specific probe
[0029] According to the human Mycobacterium tuberculosis gene sequence reported by NCBI, homology comparison analysis was performed to find the most conserved region of the gene. IS6110, MPRT40 and 16srRNA genes were selected as target sequences, and primer5.0, oligo6.0 and Primerexpress2 were used in combination. 0 software, designed three sets of binding bacillus-specific fluorescent probes. Put the probe into NCBI for BLAST homology analysis, the results showed that it was heterologous to other gene sequences, thus avoiding the non-specific existence during hybridization. The probe was synthesized by Shenggong Bioengineering (Shanghai) Co., Ltd.
[0030] The sequences of the three oligonucleotide probes are shown in SEQ ID NO: 1-3, respectively.
[0031] Preparation of fluorescently labeled probe: FITC fluorescein is selected, and the probe is directly labeled by the notch translation method. Fluorescein directly with the probe ...
Embodiment 2
[0041] Example 2 Preparation of detection kit
[0042] Hybrid solution composition: 10% (w / v) dextran sulfate, 10 mM NaCl, 20% (v / v) formamide, 0.1% (w / v) sodium pyrophosphate, 0.2% (w / v) polyvinyl pyrrolidone , 5mMNa2EDTA, 0.1%(v / v) TritonX-100, 50mMTris / HCl (pH 7.5); three specific probes (prepared in Example 1) each with 30pM fluorescently labeled.
[0043] Preparation of DAPI counterstain: Take 2.2 mg of DAPI powder, add 550 μl of distilled water and mix well to make DAPI stock solution 4 mg / ml. Store at 4°C. Working solution: Take 2.5μl of DAPI stock solution into 5ml distilled water, mix well, 2μg / ml.
Embodiment 3
[0044] Example 3 Application of detection kit
[0045] Sputum samples and lesion tissue samples were taken from the same patient, a total of 20 cases.
[0046] The sputum sample adopts the Roche culture method, specifically, the modified Lowenstein-Jensen medium is used to culture the processed sputum. Specifically, 1 mL of a sputum specimen was added to 2 mL of 4% sodium hydroxide, vortexed for 30 seconds to mix, and allowed to stand at room temperature for 20 minutes, during which it was shaken 2 to 3 times to promote liquefaction of the sputum. Use a sterile graduated capillary pipette to take 0.1 mL of digested sputum, slowly and evenly inoculate each medium slant, and place it in a 37°C incubator for culture. Observe the culture on the 3rd and 7th day after inoculation, and then observe once a week until the 8th weekend. If the culture is positive, report it at any time. No bacterial growth is seen until 8 weeks after culture, and the report is culture negative.
[0047] The...
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