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DNA (Deoxyribose Nucleic Acid) molecule, pichia pastoris recombinant plasmid and pichia pastoris recombinant bacterium for efficiently expressing PprI protein of deinococcus radiodurans

A DNA molecule, the technology of Pichia pastoris, applied in the field of Pichia pastoris recombinant bacteria, can solve the problems of reduced activity, unfavorable high expression of radioduran PprI protein, and different amino acid codon preferences of composition and function proteins.

Inactive Publication Date: 2014-07-23
SUZHOU UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0005] The application of prokaryotic expression system Escherichia coli can efficiently express and purify PprI protein [Zhang Yongqin, Zhou Hui, Chen Jie, Yang Zhanshan. Journal of Radiation Research and Radiation Technology, 2011,29(2):117-122.] However, this technology exists Many defects: 1. The expressed protein has not undergone post-translational modification such as glycosylation, resulting in reduced activity; 2. The expressed protein exists in the form of inclusion bodies, and denatured extraction will also lead to reduced protein activity; 3. Escherichia coli itself endotoxin and toxic proteins can be mixed in the target protein product, resulting in limited application
However, Radiodurans belongs to prokaryotes, and there are huge differences in phylogenetic evolution between it and the eukaryotic Pichia pastoris, such as gene and protein composition and function, protein amino acid codon preference, etc.
Therefore, if the pprI gene of radiodurans is directly constructed into the expression system of Pichia pastoris by genetic engineering, preliminary experimental studies have proved that it is impossible and not conducive to the high-efficiency expression of radiodurans PprI protein, which is difficult according to the general genetic modification technology in the field successfully solved the problem

Method used

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  • DNA (Deoxyribose Nucleic Acid) molecule, pichia pastoris recombinant plasmid and pichia pastoris recombinant bacterium for efficiently expressing PprI protein of deinococcus radiodurans
  • DNA (Deoxyribose Nucleic Acid) molecule, pichia pastoris recombinant plasmid and pichia pastoris recombinant bacterium for efficiently expressing PprI protein of deinococcus radiodurans
  • DNA (Deoxyribose Nucleic Acid) molecule, pichia pastoris recombinant plasmid and pichia pastoris recombinant bacterium for efficiently expressing PprI protein of deinococcus radiodurans

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Experimental program
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Effect test

Embodiment 1

[0049] Embodiment 1: Optimization and synthesis of DNA molecule of the present invention

[0050] On the premise of keeping the amino acid sequence of PprI protein unchanged, the present invention optimizes and transforms the sequence of the pprI gene (DR_0167, Gene ID: 1798483) of Deinococcus radiodurans R1 (Deinococcus radiodurans R1) open reading frame (Open Reading Frame, ORF), and encodes and synthesizes A new pprI gene—Pi-pprI gene, which is the nucleotide sequence shown in SEQ ID NO:1, was developed in order to efficiently express the target protein.

[0051] 1. Synthesis method

[0052] According to the artificially designed Pi-pprI gene, the present invention designs and synthesizes a series of overlapping (OVERLAP) primers of the nucleotide sequence shown in SEQ ID NO: 2-41, and synthesizes the primers shown in SEQ ID NO: 1 through Overlapping PCR. Nucleotide sequence and DNA molecules with CpoI restriction endonuclease sites and NotI restriction endonuclease sites ...

Embodiment 2

[0059] Example 2: Synthesis of DNA molecules (introduced with 6×His tag sequence) according to the present invention

[0060]Using the DNA molecule obtained in Example 1 as a template, use a primer with a nucleotide sequence shown in SEQ ID NO:42 and a primer with a nucleotide sequence shown in SEQ ID NO:41 with a 6×His tag sequence (CATCATCACCACCATCAT) Perform PCR amplification to obtain a DNA molecule (with a CpoI restriction endonuclease site and a NotI restriction endonuclease site) comprising the nucleotide sequence shown in SEQ ID NO: 1 and a 6×His tag sequence. Wherein, the primer SEQID NO:42 introduces a 6×His tag sequence based on the primer p-1.

[0061] PCR amplification conditions were as follows: pre-denaturation at 95°C for 5 min, denaturation at 94°C for 30 s, annealing at 50°C for 30 s, extension at 72°C for 90 s, and a total of 30 cycles, and finally extension at 72°C for 10 min, and incubation at 4°C.

[0062] Get 3 μ l of PCR amplification product and detec...

Embodiment 3

[0063] Embodiment 3: Construction of Pichia pastoris recombinant plasmid

[0064] The Pichia pastoris expression vector pHBM905A (8923bp) was digested with Cop I and Not I, separated by agarose electrophoresis, and the large fragment (7719bp) was recovered by tapping the gel.

[0065] The PCR product (1005bp) synthesized in Example 2 was treated with T4 DNA polymerase in the presence of dTTP, and then ligated with the large fragment recovered from rubber tapping to obtain the Pichia pastoris recombinant expression plasmid pHBM-905A-Pi-pprI (8706bp), Abbreviated as pHBM-Pi-pprI, the construction flow chart is shown in figure 2 .

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Abstract

The invention relates to the field of biotechnology, and discloses a DNA (Deoxyribose Nucleic Acid) molecule containing a sequence shown as SEQ ID NO:1, a pichia pastoris recombinant plasmid inserted into the DNA molecule and a pichia pastoris recombinant bacterium which is used for converting the pichia pastoris recombinant plasmid into a pichia pastoris competent cell and efficiently expressing the PprI protein of deinococcus radiodurans. The pprI gene sequence of the deinococcus radiodurans is optimized and modified on the premise that an amino acid sequence of the PprI protein is not changed, so that a new Pi-pprI gene is synthesized in a coding manner; and a recombinant plasmid pHBM-905A-Pi-pprI of the pichia pastoris Pi-pprI gene and a pichia pastoris recombinant engineering bacterium GS115-Pi-pprI for the secretory expression of the PprI protein are successfully constructed for the first time, so that the efficiently expressed and purified PprI protein is obtained, thereby laying a solid foundation for the development and the application of protein radiation resisting medicines independently developed in China in the field of radiation injury prevention and treatment.

Description

technical field [0001] The invention relates to the field of biotechnology, in particular to a DNA molecule, a Pichia recombinant plasmid and a Pichia recombinant bacterium that highly expresses the PprI protein of radiodurans. Background technique [0002] In nuclear emergencies such as nuclear accidents, nuclear terrorism, and nuclear war, ionizing radiation can cause severe acute radiation injury (ARI) to the human body. The treatment and protection of radiation damage is related to the peaceful use of atomic energy and national nuclear safety. Therefore, research in this field has become a research field that governments and scholars around the world pay close attention to and focus on. [0003] Deinococcus radiodurans (DR) is the most radiation-resistant prokaryotic bacterium found on the earth so far. The strong radiation resistance of this bacterium is related to its own perfect and efficient DNA repair system. A variety of DNA repair genes and its protein play a cru...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12N15/31C12N15/81C12N1/19A61K38/16A61P17/16A61P39/00C12R1/84
CPCA61K38/00C07K14/195C12N9/52A61P17/16A61P39/00C12N15/815
Inventor 杨占山吴伟乔惠萍文玲施怡任丽丽于冬
Owner SUZHOU UNIV
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