Derivative peptide w8 based on amphibian frog-derived antimicrobial peptide and its preparation method and application
An antimicrobial peptide and amphibian technology, applied in the field of derivative peptides based on amphibian frog-derived antimicrobial peptides, can solve the problems of weak antibacterial activity, narrow antibacterial spectrum, protease sensitivity, etc., and achieve low hemolytic activity and simple experimental techniques.
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Embodiment 1
[0013] Embodiment 1: the design of antibacterial peptide
[0014] Based on the sequence of the naturally occurring amphibian frog-derived antimicrobial peptide Kunitzin-RE (AAKIILNPKFRCKAAFC), the -CKAAFC-sequence was truncated, and the 3, 7, and 9 amino acids were replaced with the positively charged amino acid - arginine. Antimicrobial peptide P8 (AARIILRPRFR): Based on the template, a mutant peptide was designed for proline co-amino acid Trp at position 8. The amino acid sequence of the peptide is shown as W8 in Table 1.
[0015] Table 1 Amino Acid Sequence of Derived Peptides
[0016]
[0017] The charges of P8 and W8 are both +4, the hydrophobic values are 0.399 and 0.538, and the hydrophobic moments are 0.211 and 0.275, respectively. The carboxyl termini of the two peptides P8 and W8 were amidated to increase a positive charge and increase the stability of the peptides. In the case of improving the bactericidal activity of the W8 antimicrobial peptide, the hemolyt...
Embodiment 2
[0018] Embodiment 2: Synthetic W8 antimicrobial peptide by solid-phase chemical synthesis
[0019] 1. The preparation of antimicrobial peptides is carried out one by one from the C-terminal to the N-terminal, and is completed by a peptide synthesizer. First, Fmoc-X (X is the first amino acid at the C-terminal of each antimicrobial peptide) is inserted into Wang resin, and then the Fmoc group is removed to obtain X-Wang resin; then Fmoc-Y-Trt-OH (9 -Fmoxy-trimethyl-Y, Y is the second amino acid at the C-terminus of each antimicrobial peptide); according to this procedure, it is synthesized from the C-terminus to the N-terminus until the synthesis is completed, and the side of the Fmoc group is removed chain protection resin;
[0020] 2. Add a cleavage reagent to the peptide resin obtained above, react for 2 hours at 20°C in the dark, filter; wash the precipitate with TFA (trifluoroacetic acid), mix the washing liquid with the above filtrate, concentrate with a rotary evaporato...
Embodiment 3
[0031] Embodiment 3: the mensuration of antimicrobial peptide antibacterial activity
[0032] 1. Determination of antibacterial activity: Prepare the peptide as a storage solution for use. The minimum inhibitory concentrations of several antimicrobial peptides were determined by the broth microdilution method. Using 0.01% acetic acid (containing 0.2% BSA) as the diluent, a series of gradient antimicrobial peptide solutions were sequentially prepared using the double dilution method. Take 100 μL of the above solution and place it in a 96-well cell culture plate, then add an equal volume of the bacteria solution to be tested (~10 5 individual / mL) in each well. Positive controls (containing bacterial fluid but not antimicrobial peptides) and negative controls (neither bacterial fluid nor peptides) were set up. Incubate at a constant temperature of 37°C for 20 hours, and the minimum inhibitory concentration is the one where no turbidity is seen at the bottom of the well with th...
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