Diagnosis and treatment marker of prostate cancer
A technology of prostate cancer and markers, which is applied in the field of diagnostic and therapeutic markers of prostate cancer, and can solve problems affecting the effect of tumor treatment
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Embodiment 1
[0035] Example 1 High-throughput sequencing screening of differentially expressed genes
[0036] 1. Sampling
[0037] From October 2012 to December 2015, 27 tissue samples were obtained from the Department of Urology at Peking Union Medical College Hospital. All samples were confirmed by pathological examination, including 8 cases of paracancerous tissue samples and 19 cases of prostate cancer samples. Store in -80°C low temperature refrigerator.
[0038] 2. Total RNA extraction from tissue samples
[0039] use Reagent (invitrogen, Cat. No. 15596-018) was used to extract sample RNA, and the experimental operation was carried out according to the product manual. The specific operation was as follows:
[0040] After collecting the samples, freeze them in liquid nitrogen. After taking them out, put the tissue into a pre-cooled mortar for grinding. After the tissue sample is powdered:
[0041] ① Add Trizol and store at room temperature for 5 minutes;
[0042] ② Add 0.2 mL of...
Embodiment 2
[0051] Example 2 RT-PCR verification of the expression of NCRNA00087 in prostate cancer tissues and paracancerous tissues
[0052] 1. Materials
[0053] 20 prostate cancer tissue samples and 8 paracancerous tissue samples were collected from prostate cancer samples during urological surgery in Peking Union Medical College Hospital from 2012 to 2015, and they were grouped and numbered. All samples were confirmed by pathological examination.
[0054] 2. Method
[0055] 2.1 Extract the total RNA from the tissue sample, the same as the extraction method in Example 1.
[0056] 2.2 Synthesis of cDNA by reverse transcription
[0057] use III Reverse Transcriptase (invitrogen, Cat. No. 18080-044) was used for cDNA reverse transcription, and the experimental operation was carried out according to the product manual. The specific operation was as follows:
[0058] Using a reverse transcription kit, 1 μg of total RNA was reverse-transcribed with reverse transcription buffer to synt...
Embodiment 3
[0072] Example 3 RNAi interferes with the expression of NCRNA00087 and its impact on prostate cancer cells
[0073] 1. Materials
[0074] 1. Source of cells
[0075] Prostate cancer PC-3 cell line was purchased from ATCC, USA
[0076] 2. siRNA design and synthesis
[0077] According to the online design software siDirect version 2.0 (http: / / design.rnai.jp / ), according to the gene sequence, refer to NCBI: NR_024493.2 (NCRNA00087), design the corresponding siRNA, the specific sequence is shown in Table 3. After the design is sent to the synthesis company for synthesis.
[0078] Table 3 List of siRNA sequences
[0079]
[0080] 2. Experimental method
[0081] 1. Cell grouping
[0082] Group C: blank control group; Group C1: liposome transfection group; C2 group: non-specific siRNA-NC transfection group; S1, S2 groups: specific siRNA transfection group.
[0083] 2. Transfection
[0084] Follow Lipofectamine TM The steps provided by 2000Transfection Reagent were carried...
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