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Real-time fluorescence quantitative PCR (Polymerase Chain Reaction) kit for detecting expression level of HER2 genes

A real-time fluorescence quantification, gene expression level technology, applied in fluorescence/phosphorescence, microbial determination/inspection, biochemical equipment and methods, etc., can solve the problems of lack of standardization, high detection cost, difference in detection results, etc., to avoid primers The effect of dimerization, economic burden reduction, and fast detection speed

Active Publication Date: 2012-10-10
XIAMEN UNIV
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AI Technical Summary

Problems solved by technology

[0008] Immunohistochemical detection of HER2 protein expression is currently the most commonly used method. It uses a specific antibody labeled with a chromogenic agent to qualitatively and A new technology for localization and quantitative determination, IHC method has been widely used in clinical pathological diagnosis due to its advantages of simple operation, low price, convenient interpretation, and easy storage, but due to the lack of standardization of the detection process, and the results are easily affected by tissue processing , the difference in sensitivity of different antibodies, the difference in subjective judgment of observers, and the influence of the interference of chromosome 17 polysomy often cause the difference in the test results
[0009] In comparison, the fluorescence in situ hybridization method hybridizes a fluorescently labeled DNA probe to a DNA target sequence in the nucleus, and uses a fluorescent detection system to perform qualitative, quantitative or relative positioning analysis of the DNA to be tested, which detects frozen tissue or formalin The stability of HER2 gene amplification in fixed and paraffin-embedded tissues is better, and it is not easily affected by tissue processing, etc., and the HER2 gene and chromosome 17 centromere are simultaneously marked with different colors of fluorescent signals, eliminating chromosome 17 polysomy However, FISH also has disadvantages such as expensive detection cost, long-term preservation of results due to fluorescence quenching, difficult operation, long time, and it is not conducive for pathologists to observe the morphology of tissue cells under dark field, which leads to false positive or false positive results of HER2. Negative misjudgment and other defects

Method used

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  • Real-time fluorescence quantitative PCR (Polymerase Chain Reaction) kit for detecting expression level of HER2 genes
  • Real-time fluorescence quantitative PCR (Polymerase Chain Reaction) kit for detecting expression level of HER2 genes
  • Real-time fluorescence quantitative PCR (Polymerase Chain Reaction) kit for detecting expression level of HER2 genes

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0055] Example 1 HER2 gene expression level detection kit and its use

[0056] 1 Prepare a kit including the following components: 1 tube of HER2 gene PCR reaction solution (1200 μL), 1 tube of ACTB gene PCR reaction solution (1200 μL), 1 tube of Taq enzyme system (30 μL), and 1 tube of control substance (300 μL).

[0057] 2 Collection, storage and transportation of samples:

[0058] 2.1 Types of samples used: fresh tissue, frozen tissue.

[0059] 2.2 Sample collection: Immediately after the operation, the tumor tissue was frozen in liquid nitrogen and stored at -80°C.

[0060] 2.3 Storage and transportation of samples: Fresh tissues and frozen tissues are stored at -80°C, and the storage period is 2 years. Samples are shipped on dry ice over long distances.

[0061] 3. Nucleic acid extraction:

[0062] The Invitrogen Trizol RNA Extraction Kit is recommended. Operate according to the instructions, and finally dissolve with 30 μL DEPC water, and then carry out reverse tran...

Embodiment 2

[0072] Example 2 Application of HER2 gene expression level detection kit to detect 8 cases of clinical samples

[0073] Select 4 cases of breast cancer tissue samples identified as negative for HER2 gene expression by IHC, and 4 cases of breast cancer tissue samples as positive for HER2 gene expression by IHC. After RNA extraction, reverse transcription is performed immediately, and the obtained reverse transcription products are detected, and the control substance and NTC are detected at the same time.

[0074] Interpretation of test results: HER2 gene (triangular curve) and ACTB gene (smooth curve) have no amplification signal and are at baseline, indicating that the system is not contaminated; ) curve is S-shaped, indicating that the system can effectively detect the expression of HER2 gene ( Figure 5 and 6 ).

[0075] The amplification curves of the 4 samples that were identified as negative for HER2 gene expression by IHC were S-shaped, and the F values ​​after quantif...

Embodiment 3

[0077] Example 3 Using the HER2 Gene Expression Level Detection Kit and Beijing Soao Biomedical Technology Co., Ltd. Human Her2 / neu Gene (Her2) Nucleic Acid Detection Kit to Simultaneously Detect 5 Cases of Clinical Samples

[0078] Five breast cancer tissue samples identified by IHC as positive for HER2 gene expression were selected, RNA was extracted and immediately reverse-transcribed, and the obtained reverse-transcribed products were detected.

[0079] Interpretation of the test results: The HER2 gene amplification curves of the two kits are both S-shaped, indicating that both systems can effectively detect the expression of the HER2 gene, and the Ct values ​​of the HER2 gene (triangular curve) using the HER2 gene expression level detection kit are respectively were 18.52, 19.69, 20.81, 20.82, 21.13, and the Ct values ​​of HER2 gene (smooth curve) were 18.54, 19.53, 20.65, 20.79, 21.08 ( Figure 15 and 16 ), indicating that this kit has good specificity in detecting the...

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Abstract

The invention provides a real-time fluorescence quantitative PCR (Polymerase Chain Reaction) kit for detecting the expression level of HER2 genes and relates to a PCR kit. The real-time fluorescence quantitative PCR kit comprises PCR reaction liquid of the HER2 genes, PCR reaction liquid of ACTB genes, a Taq enzyme system, a control product and a packaging object; and the adopted primer is an annular primer, 3-8 self-designed basic groups are at the 5' end, and can be combined with the sequence at the 3' end under proper conditions so as to form double chains. The real-time fluorescence quantitative PCR kit has the advantages that the non-specific amplification products especially primer dimer generated by nonspecific amplification products especially the primer can be effectively prevented from being formed, the specificity is increased; and a relative-quantitative RT-PCR method is utilized for detecting the expression level of the HER2 genes of a patient with the breast cancer, adopts a 2-delta deltaCt value method for quantifying the detected result, and can be used for diagnosis of early stage and transferring of the breast cancer and assisting multiple fields such as clinicalmedicine selection and prognosis.

Description

technical field [0001] The invention relates to a PCR kit, in particular to a real-time fluorescent quantitative PCR kit for detecting the expression level of HER2 gene. Background technique [0002] Breast cancer is the second most common tumor in women, second only to non-melanoma skin cancer, and the second leading cause of death among women with cancer. The incidence is often related to heredity. According to epidemiological surveys, 5% to 10% of breast cancers are familial. Since the 20th century, the incidence of breast cancer has been increasing all over the world. According to statistics, the number of deaths from breast cancer in the world in 2008 alone was as high as 458,503, accounting for 13.7% of female malignant tumor deaths (Boyle P, Levin B. World Cancer Report 2008 [M]. France: IARC, 2008). In recent years, the incidence of female breast cancer in my country is also rising sharply at an annual growth rate of 3% to 4%. About 200,000 women suffer from breast...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68G01N21/64
Inventor 曾骥孟郑立谋李怡张换敬
Owner XIAMEN UNIV
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