Prevention of lung cancer target plekhn1 and its application
A technology of PLEKHN1, 1.PLEKHN1, applied in the new target field of lung cancer, can solve the problems of increased lung cancer, incompletely clear mechanism of lung cancer, resistance, etc., and achieve the effect of preventing lung cancer and promoting the malignant transformation of lung cells
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Embodiment 1
[0046] Example 1. Normal lung epithelial cells were treated with arsenic to up-regulate the protein expression level of PLEKHN1 in a concentration- and time-dependent manner
[0047] 1 Cell poisoning treatment
[0048] (1) Short-term exposure of cells to arsenic poisoning:
[0049] a) Multiple wells of a six-well plate for cell seeding, 200,000 Beas-2B cells per well, using DMEM medium containing 10% FBS, at 37°C in constant temperature CO 2 Cultivate in an incubator; the cell density reaches about 70% after 24 hours.
[0050] b) 24 hours after seeding the plate, start to replace the medium with DMEM medium containing 0.1% FBS, and treat for 12 hours according to the same culture conditions as above.
[0051] c) After 12 hours, add arsenic compounds with concentrations of control (0), 0.5, 1 and 2 μM respectively for 12 hours ( figure 1 A); the fixed arsenic concentration was 1 μM, and the control group was treated (0), 6, 12 and 24h ( figure 1 B). The result is as figur...
Embodiment 2
[0098]Example 2. The expression level of PLEKHN1 in clinical lung cancer tissues shows an overall up-regulation trend.
[0099] 1. TCGA database data analysis
[0100] Download lung cancer sequencing data and clinical data from the TCGA database (https: / / tcga-data.nci.nih.gov / ). Use the R package edgeR to preprocess the data, standardize the raw count to log-CPM value, perform linear modeling, and use the precision weight calculated by the voom function to adjust the average variance relationship. Using the linear regression and empirical Bayesian methods provided by the limma package, the differential expression analysis of Tumor VS Normal in the mRNA data was performed. After statistical calculation, the corresponding P.Value value was obtained, and the Benjamini&Hochberg method was used for multiple test correction to obtain the corrected P value, which is adj.P.Value. Differential expression thresholds are all adj.P.Value2. The result is as figure 2 described in A. T...
Embodiment 3
[0129] Example 3, PLEKHN1 can significantly promote the formation of Beas-2B cell clone colonies induced by arsenide for a long time.
[0130] 1 Cell transfection related steps (1) Lipofectamine transfection method:
[0131] a) Beas-2B cells were plated for 24 hours, and when the cells grew to 80%, 1 ml of full culture was replaced 1 hour in advance.
[0132] b) Add 1 μg of target DNA (GFP-PLEKHN1 plasmid or PEGFP-C1 plasmid, both purchased from Shanghai Sunny Biotechnology Co., Ltd.) into 50 μl of serum-free DMEM containing high glucose and mix well.
[0133] c) Take 3μl PolyJet TM Add 50 μl of serum-free DMEM containing high glucose to the reagent, and mix gently with a gun for 3-4 times.
[0134] d) Immediately place the diluted PolyJet TM Add the reagent to the diluted DNA solution, and gently suck up and down to mix 3-4 times. (sequence only PolyJet TM plus DNA)
[0135] e) Incubate at room temperature for 10-15 minutes, not exceeding 20 minutes.
[0136] f) Add 1...
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