Small interfering RNA targeting human irak1 gene and its application
A small interference, gene technology, applied in DNA/RNA fragments, applications, gene therapy and other directions, can solve problems such as poor prognosis, easy damage to healthy dental tissue, irritable dental pulp tissue, etc., to reduce expression and promote growth. Effect of dentin differentiation and inhibition of the development of inflammation
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Embodiment 1
[0023] Example 1: Obtaining specific interference sequences targeting human IRAK1 gene
[0024] Design the siRNA sequence according to the human IRAK1 gene sequence (Genbank: NM_001025243) disclosed by NCBI, and refer to the RNAi online design software provided by the website of Invitrogen Corporation of the United States (its website http: / / rnaidesigner.invitrogen.com / rnaiexpress / sort.do) for specific design, After comparison and screening, the target gene sequence containing 19 bases was obtained: 5'-CCGAAGAAAGTGATGAATT-3' (SEQ ID NO: 1), and the corresponding siRNA interference sequence was synthesized by Shanghai Jikai Gene Chemical Technology Co., Ltd., as follows:
[0025] Sense strand: 5'-GCCCGAAGAAAAGUGAUGAAUU-3' (SEQ ID NO:2)
[0026] Antisense strand: 5'-AAUUCAUCACUUUCUUCGGGC-3'(SEQ ID NO:3)
Embodiment 2
[0027] Example 2: Dental pulp stem cell culture and Western blot detection of the effect of siRNA on IRAK1 protein expression
[0028] 1) During the experiment, the dental pulp cells were derived from clinically normal and carious third molars and second premolars that needed to be extracted due to orthodontics. The patients were 15-25 years old and in good general condition. Informed consent was obtained from the participants, and it was approved by the Medical Ethics Committee of the Affiliated Hospital of Nantong University. The extracted teeth were immediately put into the basic DMEM culture medium (containing 100 U / mL penicillin / 100 μg / mL streptomycin) pre-cooled by ice packs. After rinsing the surface of the tooth with povidone iodine on the ultra-clean bench, rinse the surface of the tooth with sterile normal saline until there is no blood stain, use a sterilized rongeur to open the pulp cavity along the enamel-cementum junction, take out the pulp with tweezers, and cut...
Embodiment 3
[0032] Example 3: Western blot detection of siRNA on the odontogenic differentiation ability of dental pulp stem cells (DPSS, DMP-1 protein expression)
[0033] 1) Digest the dental pulp stem cells in the logarithmic growth phase with 0.25% trypsin to make a single cell suspension (cell number 1×10 5 ), inoculated in 6-well plate, 200uL per well. 37°C, 5% CO 2 After culturing in the incubator for 24 hours, discard the supernatant, add 400 uL of serum medium to each well, and transfect for 4 hours (the experiments were divided into blank group, control group, and siRNA group as described above).
[0034] 2) After 24 hours of transfection of dental pulp stem cells, remove the medium, wash the cells with PBS 1-2 times, add 100uL RIPA lysate to the cells, collect the cells into a 1.5mL tube, let stand on ice for 30min, and centrifuge at 12000rpm / min. The supernatant was taken after 30 min and prepared as a protein sample for analysis. Add the prepared protein into the loading b...
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