Gene chip for detecting hypertension and kit thereof
A technology of gene chips and kits, applied in the field of prepared kits, can solve the problems of low efficiency, time-consuming and laborious detection, etc., and achieve the effect of high detection efficiency, good sensitivity, and wide application range
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Embodiment 1
[0027] The acquisition of embodiment 1 aptamer
[0028] Recombinant human glycerol triphosphate dehydrogenase-2 was purchased from ProSpec, product number ENZ-437.
[0029] Construct a random single-stranded DNA (ssDNA) library and primers: construct a ssDNA library with fixed sequences at both ends and a random sequence of 35 nucleotides in the middle, where N represents any one of A, T, C, and G: 5'- ACTTTAGTAGCCAGTGAGAC-N35-GGAGCAGTACAGTGATCAGT-3'.
[0030] The upstream primer 1 is 5'-ACTTTAGTAGCCAGTGAGAC-3', and the downstream primer 2 is 5'-ACTGATCACTGTACTGCTCC-3'. The 5' end of the downstream primer sequence needs to be labeled with biotin. Random single-stranded DNA library and primers can be synthesized by primer synthesis company.
[0031] (1) Use primer 1 and primer 2 to amplify the single-stranded DNA library: use asymmetric PCR, the concentration ratio of primer 1 / primer 2 is 100:1, and the amplification conditions are: 94°C pre-denaturation: 3min, then 94°C den...
Embodiment 3
[0058] Example 3 Aptamer-coated biochip
[0059] We coated the most affinity aptamer SEQ ID NO: 1-26 on the surface substrate, and then combined with SPR biosensor for detection, the specific method is as follows:
[0060] Biochip Surface Pretreatment Put the biochip with streptavidin-coated gold film electrode on the surface substrate into 1.0mol / L NaOH, soak and clean for 20min, take it out, wash it with deionized water for 3 times, and then put the biochip into Piranha It was treated in the solution for 15 minutes, and immediately put it into absolute ethanol to soak for 5 minutes after taking it out, and then dried it with nitrogen gas for later use.
[0061] Aptamer pretreatment: dissolve in PBS buffer, denature at 95°C for 3 minutes, quickly ice-bath for 2 minutes, and then fix with thiol method.
[0062] Thiol-based probe immobilization: the denatured biotinylated aptamer covers the pretreated chip surface matrix, so that the aptamer is firmly fixed on the biochip, and...
Embodiment 4
[0065] Adapter specificity analysis and stability analysis described in embodiment 4
[0066] NADH dehydrogenase, human type III alcohol dehydrogenase, BSA, human type 2 11β-hydroxysteroid dehydrogenase protein and 26 aptamers were used for specificity detection. Binds to these proteins, but retains binding activity only to human glycerol triphosphate dehydrogenase.
[0067] 0.5 ug of the aptamer was taken and placed in normal temperature serum and aqueous solution respectively for four weeks. Through RT-PCR detection, it was found that its structure was stable and not degraded after being placed for four weeks. It shows that the aptamer has strong stability.
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