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Multiple relative real-time fluorescent quantitative PCR detection kit for rapidly detecting number of human chromosomes

A real-time fluorescence quantitative and chromosome number technology, applied in the field of medical testing, can solve problems such as false positives, false negatives, and inaccurate results, and achieve the effect of ensuring consistency

Inactive Publication Date: 2016-08-17
孙雷
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, due to the use of two pairs of primers to amplify different fragments, very small changes in annealing temperature or differences in DNA quality will cause false negative or false positive results, resulting in inaccurate results (Helmy SM, Ismail S, Bassiouni R, et al.Sensitivity of DCSR3 / GAPDH ratio using quantitative real-time PCR in the rapid prenatal diagnosis for down syndrome[J].Fetal DiagnTher,2009,25(2):220-223.)

Method used

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  • Multiple relative real-time fluorescent quantitative PCR detection kit for rapidly detecting number of human chromosomes
  • Multiple relative real-time fluorescent quantitative PCR detection kit for rapidly detecting number of human chromosomes
  • Multiple relative real-time fluorescent quantitative PCR detection kit for rapidly detecting number of human chromosomes

Examples

Experimental program
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Effect test

Embodiment 1

[0059] Embodiment 1: Use the kit of the present invention to treat normal specimens, specimens to be tested with trisomy 13, specimens to be tested with trisomy 18, specimens to be tested with trisomy 21, specimens to be tested with 47,XXY, specimens to be tested with 45, X specimens, 47 to be tested, and XYY specimens are tested.

[0060] 1. Alignment query of repeated sequences

[0061]Through the Blast function of NCBI, the sequences on different chromosomes are compared, and the specific repetitive sequences of the two chromosomes on the target chromosome and the reference sequence chromosome are found, and the specificity of the repetitive sequences is verified by designing different primers. The final repeated sequences screened out are as follows:

[0062] (1) The repeated sequences between chromosome 21 and chromosome 18 are chromosome 21 sequence (NC_000021.8: 14678083-14695820; 29363117-29409417) and chromosome 18 sequence (NC_0000018.10: 15042954-15089199);

[006...

Embodiment 2

[0148] Example 2: Using the kit, method, steps, etc. described in Example 1 to detect clinical samples

[0149] Using the kit, 33 normal samples, 12 samples of trisomy 21, 3 samples of trisomy 13, 6 samples of trisomy 18, 3 samples of 45, X samples, 2 samples of 47, XXY samples, and 1 sample of 47 , XYY samples for detection, all samples are derived from DNA samples determined by traditional karyotype analysis methods.

[0150] 2 through the repeat sequence between chromosome 21 and chromosome 18 -△△CT The value determines the copy number of chromosome 21 and chromosome 18.

[0151] 2 through the repeat sequence between chromosome 13 and chromosome 1 -△△CT The value determines the copy number of chromosome 13.

[0152] 2 through repeats between chromosomes 16 and X -△△CT The value determines the copy number of the X chromosome.

[0153] 2 through the repeat sequence between chromosome 1 and Y -△△CT The value determines the copy number of the Y chromosome.

[0154] Table...

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PUM

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Abstract

The invention discloses a multiple relative real-time fluorescent quantitative PCR detection kit for rapidly detecting the number of human chromosomes. The kit comprises two reaction tubes of a group A reaction system and a group B reaction system, wherein the group A reaction system comprises two pairs of primers and four Taqman probes which are used for detecting repetitive sequences between chromosomes 21 and 18 and repetitive sequences between chromosomes 13 and 1, and are mainly used for detecting the number of chromosomes 13, 18 and 21; the group B reaction system comprises two pairs of primers and four Taqman probes which are used for detecting repetitive sequences between chromosomes 16 and X and repetitive sequences between chromosomes 1 and Y, and are mainly used for detecting the number of chromosomes X and Y. The kit disclosed by the invention is capable of respectively detecting the number of the chromosomes 13, 18, 21, X and Y simultaneously and independently; the results are accurate and reliable; the kit has high sensitivity and specificity.

Description

technical field [0001] The invention relates to the technical field of medical detection, in particular to a multiple relative real-time fluorescent quantitative PCR detection kit for rapidly detecting the number of human chromosomes. Background technique [0002] Chromosomal diseases are mainly caused by abnormalities in the number or structure of chromosomes. Clinically, they often cause miscarriage, stillbirth, premature death, congenital mental retardation, developmental delay, multiple deformities, and sexual hypoplasia. Clinically, trisomy syndromes of chromosomes 21, 18 and 13 are the most common, and their incidence rates are 1 / 700-1 / 800, 1 / 3500-1 / 8000 and 1 / 4000-1 / 10000, respectively. At present, there is no effective treatment for this kind of chromosomal diseases. Therefore, timely prenatal diagnosis to prevent the birth of children is the main method to prevent the occurrence of chromosomal diseases. [0003] Amniotic fluid cell culture and chromosome karyotype ...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68C12N15/11
CPCC12Q1/6851C12Q1/6883C12Q2600/16C12Q2531/113C12Q2537/143C12Q2561/101C12Q2561/113
Inventor 孙雷
Owner 孙雷
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