Liquid-phase chip for detecting flu and H5N1 avian influenza virus and specific detection primer and preparation method thereof
A bird flu virus, liquid phase chip technology, applied in the field of medical detection, to achieve the effect of detecting many types of viruses
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[0038]The first step: design primers and probes, use bioinformatics knowledge and bioinformatics software to pass through the gene segment sequences of all influenza A viruses H5, N1 and NP in the nucleic acid database and the HA gene segment sequences in influenza B viruses The computer performs homology comparison, and designs degenerate primers and specific probes for each gene according to the conserved sequence; the obtained degenerate primers are as follows:
[0039] FluA-Reverse GGTCTTGTCTTTAGCCAYTCCAT
[0040] H5-Forward GGTAACGGTTGTTTCGARTTCTATCA
[0041] H5-Reverse ATAGACCAGCYACCATGATTGCCAG
[0042] N1-Forward GGACYAGTGGGAGCAGCATA
[0043] N1-Reverse TGTCAATGGTRAAYGGCAACTC
[0044] FluB-Forward AAATACGGTGGATTAAATAAAAGCAA
[0045] FluB-Reverse CCAGCAATAGCTCCGAAGAAA;
[0046] The resulting specific probes are as follows:
[0047] FluA-probe TCAGGCCCCCTCAAAGCCGA
[0048] H5-probe CCGCAGTATTCAGAAGAAGC
[0049] N1-probe TGGTCTTGGCCAGACGGTGC
[0050] FluB-probe GC...
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