Primers, kit and method for detecting Vibrio parahemolyticus by PSR (polymerase spiral reaction) isothermal amplification reaction
A hemolytic vibrio and isothermal amplification technology, applied in the biological field, can solve the problems of complex operation process, high reagent price, and high cost, and achieve the effect of simple and fast operation, low detection cost, and guaranteed reliability
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Embodiment 1
[0043] Example 1 Primer Screening for Detection of Vibrio parahaemolyticus by Polymerase Helical Reaction
[0044] 1. Design primers
[0045] According to the principle of PSR amplification reaction, multiple sets of primers as shown in Table 1 were designed for the tlh target using PrimerPremier software.
[0046] Table 1
[0047] Primer name
Sequence (5'-3')
Ft-tlh-1
ACGCCACGGTTGTAGTTCATTACAAACCAGCAAACACC
Bt-tlh-1
TACTTGATGTTGGCACCGCAGTCCGTCAAACGAATCAG
Ft-tlh-2
AGGTTTGGTTTTCTTGCGTGGAAGAGCCAACCTTATCAC
Bt-tlh-2
GTGCGTTCTTTTGGTTTGGACCACCAGTAGCCGTCAAT
Ft-tlh-3
CGTGATGTTGTAACCTTGCG-TGCGAAAGTGCTTGAGAT
Bt-tlh-3
GCGTTCCAATGTTGTAGTGC-GATGAGCGGTTGATGTCC
accelerated primer name
Sequence (5'-3')
IF-tlh-1
CCAAACTCAAGCGTAA
IB-tlh-1
AGTGAAAGCGGATTATG
IF-tlh-2
ATCACTTCAGACGCTG
IB-tlh-2
CTATGTTCGCTGTTGG
IF-tlh-3
TGTGCCTTGATGAACTCGT
IB-tlh-3 ...
Embodiment 2
[0059] Example 2 Microbiological method for detection of Vibrio parahaemolyticus (V.parahaemolyticus) ATCC27969 based on polymerase helical reaction isothermal amplification technology
[0060] 1. The method for detecting pathogenic microorganisms based on polymerase helical isothermal amplification technology. In this embodiment, Vibrio parahaemolyticus (V.parahaemolyticus) ATCC27969 is taken as an example, and the reagents used are as follows:
[0061] A. the detection primer Ft aqueous solution and the Bt aqueous solution primer, the accelerated primer IF aqueous solution, and the accelerated primer IB aqueous solution with a concentration of 50 μM each have the following sequences (5'-3'):
[0062] Detection primer Ft:
[0063] CGTGATGTTGTAACCTTGCGTGCGAAAGTGCTTGAGAT (SEQ ID NO. 1);
[0064] Detection primer Bt:
[0065] GCGTTCCAATGTTGTAGTGCGATGAGCGGTTGATGTCC (SEQ ID NO. 2);
[0066] Acceleration primer IF: TGTGCCTTGATGAACTCGT (SEQ ID NO.3);
[0067] Acceleration Primer...
Embodiment 3
[0077] The influence of embodiment 3 reaction time on PSR amplification system
[0078]The PSR amplification reaction is an efficient and rapid method for gene detection and analysis, and the detection results can be obtained within 1 hour by designing corresponding accelerated primers. At present, the methods for judging the results of PSR reactions mainly include visual observation and gel electrophoresis verification. However, gel electrophoresis can only be operated in the laboratory and cannot achieve the purpose of on-site detection. Therefore, it is hoped to build a visual reaction system to expand the application range of PSR amplification technology. Therefore, in this experiment, the best time for the best detection of the reaction was determined by visual color change-assisted electrophoresis verification. The PSR amplification reaction system was constructed with the tlh target of Vibrio parahaemolyticus, and the effect of reaction time on the PSR amplification sy...
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