PCR-specific primers, kits and methods of use for detection of thyroid cancer metastasis-related genes
A technology for gene detection and thyroid cancer, applied in the field of molecular biology, can solve the problems of false positives, low sensitivity, and short time consumption, and achieve improved detection efficiency and accuracy, simplified operation steps, and multiple detection sites Effect
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Embodiment 1
[0054] Example 1 A multiplex PCR-specific primer, kit and detection method for the detection of thyroid cancer metastasis-related genes based on high-throughput sequencing technology
[0055] 1. Design of primers
[0056] The thyroid cancer metastasis-related gene sequences involved in this example were selected from the UCSC (University of California Santa Cruz, University of California, Santa Cruz) database, and hotspot mutation primers were designed based on the relevant gene sequences, and the design scope included the thyroid cancer metastasis-related genes Mutation hotspots.
[0057] Such as figure 1 As shown, in this example, a total of 16 pairs of primers were designed for the hotspot mutation of thyroid cancer metastasis-related genes. The size of each pair of PCR-specific primers amplifies the target region is 100-150 bp, and the size of the amplified product is 250-300 bp. wide, stable structure, and multiple detection sites.
[0058] Specifically, the 16 pairs o...
Embodiment 2
[0083] Example 2 Primer Specificity Verification
[0084] Nucleic acid was extracted from peripheral blood samples (number: 1-3), fine needle puncture samples (number: 4-6), and paraffin tissue samples (number: 7-9) using the method of step S11 in Example 1, and the concentration and purity were determined. After the determination, take qualified samples and use 10mM Tris to dilute each sample to 100ng / μL, and use 1% agarose gel electrophoresis to detect the quality of each sample (the qualification standard is the same as step S11 in Example 1), and enter the group after passing the test and perform mark. Using the method of step S12 in Example 1, the above-mentioned 9 cases of qualified samples were amplified, and the sample volume was 2 μL each. After the amplified product was purified, it was detected by 1% agarose gel electrophoresis (the qualification standard was the same as in Step S13 in Example 1. step), 9 cases of samples were detected by amplification and detectio...
Embodiment 3
[0086] Example 3 Primer Detection Sensitivity Verification
[0087] Using the method of step S11 in Example 1, sample nucleic acids were extracted from peripheral blood samples (number: 1), fine needle aspiration samples (number: 4), and paraffin tissue samples (number: 7) that passed the quality inspection to verify the sensitivity of primer detection. The initial concentration of each sample is 100ng / μL, and it is diluted according to the concentration gradient of 5 times, 10 times and 20 times. After dilution, the concentration of each sample is 20ng / μL, 10ng / μL and 5ng / μL respectively, and the sample name and Concentration marks. The method of step S12 in Example 1 was used to amplify the above-mentioned 9 cases of qualified diluted samples with a sample volume of 2 μL each, and the 9 cases of samples were detected using the specific primer amplification and detection method for thyroid cancer metastasis-related genes. The control test is the same as in Example 1, and the...
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