A kind of O-type foot-and-mouth disease ctl epitope peptide and screening method
An epitope peptide, foot-and-mouth disease technology, applied in the field of molecular immunology, to achieve the effect of a wide range of applications
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Embodiment 1 6
[0028] Example 1 Preparation of six strains of pig SAL-I protein
[0029] (1) Preparation of six strains of porcine SLA-I / pMAL-p2X recombinant Escherichia coli
[0030] Six strains of pig SLA-I / pMAL-p2X recombinant Escherichia coli were constructed and preserved in the Laboratory of Molecular Immunology, School of Life Science and Technology, Dalian University. The six strains of pigs include Landrace, Yorkshire, Topek, Hebao, Yantai and Laiwu black pigs. The SLA-I / pMAL-p2X recombinant Escherichia coli was obtained by the method described in Gao Fengshan et al. (Gene, 2012, 502(2):147-153).
[0031] (2) Induced expression of SLA-I recombinant Escherichia coli
[0032] Inoculate 5 mL of SLA-I / pMAL-p2X recombinant Escherichia coli liquid from six strains of pigs into 500 mL of LB medium, shake and culture in a 37-degree incubator at 170 rpm, and detect the OD at intervals 600 , to be grown to OD 600 Between 0.6 and 0.8, add IPTG to 0.5mmol / L, and induce for 5 hours at 37 d...
Embodiment 2
[0040] The design of embodiment 2 foot-and-mouth disease virus mimic epitope peptides
[0041] Using the biological information software netMHCpan2.4 (http: / / www.cbs.dtu.dk / services / NetMHCpan), input the O-type foot-and-mouth disease virus VP1 amino acid sequence (AJ539138) and Asia1 type foot-and-mouth disease virus VP1 amino acid sequence (EF149009), select Nonapeptide, a CTL mimic epitope peptide that can bind to SLA-I protein and be presented to the cell surface to cause cytotoxic immune response is predicted under the SLA gene. A total of three 9 peptides derived from the VP1 protein of the foot-and-mouth disease virus were designed. The peptides were named Q01, Q02, and AS3 respectively, and their amino acid sequences and other basic information are shown in Table 1. Among them, both Q01 and Q02 are derived from Tibet / CHA / 99, the current epidemic strain of O-type foot-and-mouth disease at home and abroad; AS3 is derived from the epidemic strain of Asia1-type foot-and-mou...
Embodiment 3
[0043] The binding and screening of embodiment 3SLA-I protein and foot-and-mouth disease virus mimic epitope peptide
[0044] Mix 1 mL of each of the six strains of pig SLA-I proteins purified in Example 1 (protein content 1 mg / mL) with 5 mL of PBS solution, centrifuge at 4500 r / min for 20 min, remove the filtrate, add PBS to a total volume of about 5 mL, and repeat centrifugation for 3 The second time, take the upper PBS solution (containing SLA-I) and mix it with the peptide solution (Q01, Q02, AS3 or Co) respectively, the molar ratio of peptide to target protein is 10:1, and overnight at 37°C. The mixture was added to a 30K ultrafiltration tube and centrifuged at 4500r / min for 45min. Add PBS, 37°C water bath for 2min, centrifuge at 4500r / min, until the final volume is about 100uL. Add 5mL of citric acid-phosphate buffer solution to the mixture and let it stand at room temperature for 2min. Transfer to a 5K ultrafiltration tube, centrifuge at 4500r / min for 5min, and collec...
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