Pig virus gene chip and detection method thereof
A virus gene and chip detection technology, applied in the field of microbial detection, can solve the problems of false positive judgment, limited sensitivity, time-consuming, etc., achieve high-throughput accurate detection, facilitate combination, and avoid false positive effects
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Embodiment 1
[0010] A porcine virus gene chip, the gene chip includes probes immobilized on a matrix carrier, and the probes are characteristic fragments selected from the following viruses: classical swine fever virus (CSFV), porcine reproductive and respiratory syndrome virus ( PRRSV), pseudorabies virus (PRV), porcine circovirus (PCV), porcine parvovirus (PPV). The matrix carrier is a glass sheet that has undergone aldehyde treatment. The names of the probes in this example are detailed in Table 4, Table 6, and Table 9, and the nucleotide sequences of each probe are detailed in Table 10.
[0011] A method for porcine virus gene chip detection of porcine virus, said gene chip includes probes fixed on a matrix carrier, said probes are selected from the characteristic fragments of the following viruses: classical swine fever virus (CSFV), porcine reproductive and Respiratory Syndrome Virus (PRRSV), Pseudorabies Virus (PRV), Porcine Circovirus (PCV), Porcine Parvovirus (PPV); the method in...
Embodiment 2
[0020] This example is the preparation method of the gene chip in Example 1. The steps of this method are as follows:
[0021] A. Select the appropriate slide. The glass slides should meet the following conditions: choose an optical glass slide as the raw material for the preparation of the aldehyde-based substrate, with a size of 75.5 mm in length, 25.2 mm in width, and 1.0 mm in thickness; The requirements of the instrument for spotting substrates require that the error of length and width is less than or equal to plus or minus 0.2 mm, and the error of thickness is less than or equal to plus or minus 0.05 mm; at the same time, the appearance is required to be free from scratches and defects.
[0022] The reason why glass slides are selected in this embodiment is that the gene chip analysis has high requirements on the surface of the substrate, and the preparation of the surface is a strict process. The quality of surface treatment determines the degree of immobilization of...
Embodiment 3
[0046] This example is a preferred solution based on Example 1, using a gene chip detection system using random primer PCR method. This example uses the gene chip in Example 2. A method for porcine virus gene chip detection of porcine virus, said gene chip includes probes immobilized on a matrix carrier, said probes include characteristic fragments selected from the following viruses: classical swine fever virus (CSFV), porcine reproductive With Respiratory Syndrome Virus (PRRSV), Pseudorabies Virus (PRV), Porcine Circovirus (PCV), Porcine Parvovirus (PPV), the method includes the steps of:
[0047] A. Extracting viral nucleic acid to obtain a sample to be tested. In this example, classical swine fever virus (CSFV), porcine reproductive and respiratory syndrome virus (PRRSV), pseudorabies virus (PRV), porcine circovirus (PCV), porcine parvovirus (PPV), and porcine encephalitis virus (JEV), bovine viral diarrhea virus (BVDV) 7 kinds of virus standard nucleic acid (DNA / RNA) as...
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