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A rt-lamp visualization kit for detecting goose Newcastle disease virus and its application

A RT-LAMP, Newcastle disease virus technology, applied in the field of RT-LAMP visualization kits for detecting goose Newcastle disease virus, can solve the problems of easily polluted environment, inconvenient to carry, increased cost, etc., and achieves high sensitivity, easy to large-scale The effect of promoting application and using low cost

Active Publication Date: 2019-08-06
中科生物技术转移(深圳)有限公司 +1
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  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, the use of a turbidimeter not only increases the cost, but is also inconvenient to carry; some scholars use the method of adding SYBR Green I dye to the reacted system to detect the amplification product, but this observation must be opened for processing. RT-LAMP The high efficiency and high sensitivity of amplification make the product contain a large number of target fragments, and adding dyes after opening the cap is extremely easy to pollute the environment

Method used

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  • A rt-lamp visualization kit for detecting goose Newcastle disease virus and its application
  • A rt-lamp visualization kit for detecting goose Newcastle disease virus and its application
  • A rt-lamp visualization kit for detecting goose Newcastle disease virus and its application

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Embodiment 1

[0064] 1. Gene selection and primer design

[0065] The F gene is the key gene of goose Newcastle disease virus, which is related to its ability to infect the host. According to the genotypes of NDV published in GenBank, the software was used to compare and select the differentially conserved region as the design template of RT-LAMP primers, so that the designed primers can simultaneously detect various types of NDV viruses. According to the principle of RT-LAMP primer design, a set of primers (as shown in Table 1) were designed with primer5.0 for the conserved region sequence of NDV gene, including 1 pair of external primers (F3 and B3) and 1 pair of internal primers (FIP and BIP). FIP is composed of F1c (complementary sequence of F1) and F2 sequence; BIP is composed of B1c (complementary sequence of B1) and B2 sequence; primers were synthesized by Shanghai Sangon Bioengineering Technology Service Co., Ltd. Dilute with water to a 10 μmol / L solution and store at -20°C.

[0...

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Abstract

The invention discloses an RT-LAMP visualkit for detecting goose newcastle disease virus (NDV) and application thereof. The visual kit comprises a primer group and color materials, wherein the primer group is a sequence as shown by SEQ ID No: 1 to 4, and the color materials are calcein and manganese chloride. An application method of the kit comprises the following steps of firstly preparing an RT-LAMP reaction system, which comprises AMV reverse transcriptase, 10-time reaction buffer, strand displacement DNA polymerase, dNTP mixture, glycine betaine, the calcein, the manganese chloride, MgSO4, an FIP primer, a BIP primer, an F3 primer, a B3 primer and a sample RNA to be tested; then reacting the reaction system for 50min at the constant temperature of 61 to 65 DEG C, and finally inactivating for 4min at the temperature of 80 DEG C; interpreting a result through natural illumination or ultraviolet light or interpreting through the natural illumination and the ultraviolet light; if a reaction product is green under the natural light, indicating that the sample to be tested contains the NDV; if the reaction product shows obvious green fluorescence under the ultraviolet light, indicating that the sample to be tested contains the goose NDV.

Description

technical field [0001] The invention relates to the field of biotechnology, in particular to an RT-LAMP visualization kit for detecting goose Newcastle disease virus and its application. Background technique [0002] Newcastle disease (ND) is an acute and severe infectious disease caused by Newcastle disease virus (NDV), characterized by respiratory and digestive tract lesions. sick. So far, there have been four ND pandemics worldwide, causing huge losses to the poultry industry. Waterfowl, as the natural reservoir of NDV, were once considered to have strong resistance to the virus, even if they were infected with a strong strain, they did not show any clinical symptoms. In 1997, since a highly pathogenic strain to geese was isolated in Jiangsu and Guangdong, it has continued to break out among geese flocks all over the country, causing a large number of deaths. At present, goose Newcastle disease (GND) has caused huge economic losses and seriously endangered the healthy ...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12Q1/70C12Q1/6844
CPCC12Q1/6844C12Q1/701C12Q2531/119C12Q2537/1376C12Q2521/107
Inventor 刘文俊周德荣田允波黄运茂许丹宁曹楠李婉雁郑灶波
Owner 中科生物技术转移(深圳)有限公司
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