Molecular marker GRIK3 in rectal adenocarcinoma
A technology for rectal adenocarcinoma and expression products, which can be applied in the biological field and can solve the problem of low five-year survival rate
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Embodiment 1
[0055] Example 1 Screening for gene markers associated with rectal adenocarcinoma
[0056] 1. Collection of samples
[0057] Eight cases of rectal adenocarcinoma tissue and adjacent tissue samples of rectal adenocarcinoma were collected, and all the above specimens were obtained with the consent of the organizational ethics committee. All surgical resection specimens were cut into small pieces with sterilized ophthalmic scissors, put into 1.5ml sterile EP tubes soaked in 0.1% DEPC water overnight and sterilized, and the remaining tissues were stored in cryopreservation tubes and quickly put into Store in a liquid nitrogen tank at -80°C.
[0058] 2. Preparation of RNA samples
[0059] 1) Sample pretreatment: Take the sample from the -80°C liquid nitrogen tank and put it into a homogenizer soaked in 0.1% DEPC water overnight and sterilized, and grind it into powder; during the grinding process, the sample must always be in the In a liquid nitrogen environment, the grinding cu...
Embodiment 2
[0079] Example 2 QPCR sequencing to verify the differential expression of GRIK3 gene
[0080] 1. According to the detection results of high-throughput sequencing, the GRIK3 gene was selected for large-sample QPCR verification. According to the sample collection method in Example 1, 70 cases of rectal adenocarcinoma paracancerous tissues and 70 cases of rectal adenocarcinoma tissues were selected.
[0081] 2. The RNA extraction steps are the same as in Example 1.
[0082] 3. Reverse transcription:
[0083] 1) Reaction system:
[0084] Reagent volume MgCl 2
2μl 10×RT Buffer 1μl RNase-free water 3.75μl dNTP mix 1μl RNase inhibitor 0.25μl AMV reverse transcriptase 0.5μl Random 9mers 0.5μl experimental sample RNA 1μl
[0085] 2) Reverse transcription reaction conditions
[0086] According to the reverse transcription reaction conditions in RNA PCR Kit (AMV) Ver.3.0.
[0087] 30°C for 10min, 50°C for 25...
Embodiment 3
[0108] Embodiment 3 inhibits GRIK3 gene expression
[0109] 1. Cell culture (human rectal adenocarcinoma cell line HRC-99):
[0111] a. Take out the cell cryopreservation tube from the liquid nitrogen tank, immediately put the cell cryopreservation tube into warm water at 37°C, and shake it gently to melt it as soon as possible.
[0112] b. Take out the cryopreservation tube from warm water at 37°C, suck out the cell suspension with a straw, add 5ml of RPMI1640 culture medium containing 10% fetal bovine serum to the centrifuge tube, mix and centrifuge at 800rpm for 5min, remove the supernatant, and use Culture medium was washed once.
[0113] c. Add 5ml of RPMI1640 culture solution containing 10% fetal bovine serum, inoculate in a 75ml culture bottle, place at 37°C, 5% CO 2 cultured in a constant temperature incubator.
[0114] 2) Cell replacement
[0115] a. When the culture solution starts to turn yellow, take out the culture bottle from the in...
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