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Method and kit for analyzing ploidy of unicellular sex chromosomes quickly

A chromosome ploidy and rapid analysis technology, applied in the field of rapid analysis of single-cell sex chromosome ploidy, can solve the problems of long time, high cost, pollution, etc., and achieve the effect of improving accuracy, ensuring accuracy and reducing false positive rate.

Inactive Publication Date: 2015-10-21
SHANGHAI FIRST MATERNITY & INFANT HOSPITAL
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, such a chip is expensive and takes a long time (1-2 days), and the hospital itself cannot operate it. It has to be sent to a company for testing, which increases the chance of sample contamination. The cost of testing an embryo blastomere is about 6,000 yuan. , not suitable for most IVF patients
[0004] In general, the problems with existing screening methods are high cost, long time, and many turnover laboratories

Method used

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  • Method and kit for analyzing ploidy of unicellular sex chromosomes quickly
  • Method and kit for analyzing ploidy of unicellular sex chromosomes quickly
  • Method and kit for analyzing ploidy of unicellular sex chromosomes quickly

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Embodiment 1

[0038] 1. Technical principle

[0039] Please refer to figure 1 , figure 1 It is a schematic diagram of the technology for rapid analysis of unicellular sex chromosome ploidy in the present invention.

[0040] The kit of the invention is based on single cell DNA amplification and real-time quantitative PCR technology. Firstly, the trace DNA from blastomeres or embryonic trophoblast cells of embryos is amplified in equal amounts (the first round of amplification) for special fragments (marker DNA fragments on X, Y and autosomes), and then quantitatively using real-time PCR (the second round of amplification) determines the Ct value of the marker DNA fragment in each sample (the number of cycles required to reach the saturation concentration), ΔCt is the difference between the marker gene and the endogenous reference gene Ct value; ΔΔCt is the difference between the two markers The difference between gene Ct values. Since there is an inverse linear relationship between the C...

Embodiment 2

[0062] Using one case of donated embryo, analyze the ploidy of sex chromosomes. The diagnostic results are shown in Table 2, suggesting that the embryo F is female with a normal sex chromosome ratio of XX.

[0063] Table 2 Diagnosis results of unicellular sex chromosome ploidy analysis

[0064]

Embodiment 3

[0066] The accuracy of using the method of the present invention to quickly analyze the ploidy of unicellular sex chromosomes is further verified with a large sample. Collect volunteers from 100 normal males, 100 normal females, 8 cases of XXY Klinefelter syndrome, 7 cases of XO Turner syndrome, 4 cases of XYY syndrome, and 7 cases of multiple X syndrome, collect peripheral blood of volunteers, and extract whole genome DNA , using the primers of Example 1, according to the method of Example 1 to analyze unicellular sex chromosome ploidy, wherein the amount of whole genome DNA template used in the first round of PCR is 3pg. The result shows that the accuracy of the method of the present invention is 100%.

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Abstract

The invention relates to a method and kit for analyzing the ploidy of unicellular sex chromosomes quickly. According to the method, primers, as shown in SEQ ID NO.1-6, for X chromosome, Y chromosome and chromosome 21 respectively are adopted for preamplification of trace DNA from a single cell firstly, then nested primers as shown in SEQ ID NO.7-12 are adopted for real-time fluorescent quantitative PCR to obtain the DNA content values K and L of X chromosome and Y chromosome relative to the internal reference, a male standard substance, a female standard substance and a negative control group are arranged at the same time, and finally the values of K / L, K / K [female standard], L / L[female standard], K / K [male standard] and / or L / L[male standard] are calculated and the ploidy of the sex chromosomes of a sample to be tested is obtained. The method has the advantages of being high in accuracy, short in time and low in cost when used for analyzing the ploidy of the unicellular sex chromosomes and is helpful for clinical genetic diagnosis.

Description

【Technical field】 [0001] The invention relates to the field of biotechnology, in particular to a method and kit for rapidly analyzing unicellular sex chromosome ploidy. 【Background technique】 [0002] In vitro fertilization-embryo transfer, referred to as test-tube baby technology, has the opportunity to obtain the cells of an embryo before embryo transfer, thus providing conditions for pre-implantation genetics and sex screening of embryos. However, in our country and many European countries, the law does not allow purely gender screening. However, in some countries, such as the United States, sex screening before embryo transfer is permitted by law. However, sex screening to exclude sex-linked genetic diseases is permitted by law. For example, 47,XXY Klinefelter syndrome with doubled X chromosome has an incidence rate of 1 / 850 male newborns; female 45,XO, Turner syndrome with doubled X chromosome deletion has an incidence rate of 1 / 850 among female babies 1 / 2500-5000; I...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68C12N15/11
CPCC12Q1/6851C12Q1/6879C12Q2531/113C12Q2545/101C12Q2537/16
Inventor 韩毅冰陈嘉瑜张晔高绍荣
Owner SHANGHAI FIRST MATERNITY & INFANT HOSPITAL
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