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Nucleotide sequence and detection method for detecting purity of Jinyou #401 cucumber hybrid seed

A technology of hybrid seed purity and nucleotide sequence, applied in the field of DNA sequence, can solve problems such as long identification period, fuzzy identification standard, and certain degree of deviation in phenotypic characteristics, and achieve fast and accurate identification results, great application value, and saving human effect

Inactive Publication Date: 2015-07-08
TIANJIN RES INST OF VEGETABLE
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

In the past, the conventional purity identification was carried out in the field. During the fruiting period, experts went to the field to observe the characteristics and consistency of the varieties. There was a long cycle, a heavy workload, and it was easily affected by environmental factors, and the phenotypic characteristics would have a certain degree of deviation. Such problems may affect the accuracy of variety purity identification and directly affect the promotion of improved varieties; in addition, due to the long identification period, the seeds produced in the current year are often not sold until the next year, resulting in loss of business opportunities
[0003] Jinyou 401 cucumber hybrid seeds are the first-generation hybrid seeds obtained by pollination of the male parent and the female parent. It has the characteristics of high yield and excellent traits of the hybrid variety, but at the same time there is a risk of being mixed with the self-bred seeds obtained by the self-fertilization of the female parent. In the past, the identification of variety purity often required field cultivation, observing plants and commercial melons to determine whether it was a hybrid first-generation variety. There are two main disadvantages: the first is the long cycle, and the general time for receiving seeds is from July to October every year. , Jinyou 401 is an open-field variety that needs to be sown in spring or early summer for identification, so it often needs to wait until the next year for cultivation identification, and each time it takes at least 50 days from cultivation to commercial melon emergence, resulting in the newly harvested seeds not being on the market in time; The second identification standard is vague, and the identification standard of field identification is very subjective. It is completely compared with the plants and commercial melons that have been confirmed to be hybrid first-generation seeds through visual inspection. The standard is not clear.

Method used

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  • Nucleotide sequence and detection method for detecting purity of Jinyou #401 cucumber hybrid seed
  • Nucleotide sequence and detection method for detecting purity of Jinyou #401 cucumber hybrid seed
  • Nucleotide sequence and detection method for detecting purity of Jinyou #401 cucumber hybrid seed

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Experimental program
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Effect test

Embodiment 1

[0022] The method for detecting the purity of Jinyou No. 401 cucumber hybrid seeds comprises the steps:

[0023] Genomic DNA was extracted from the root tip of Jinyou 401 cucumber hybrid seeds 36 hours after germination; detailed steps for DNA extraction by CTAB method:

[0024] Add a 1-2cm long root tip to a 1.5mL centrifuge tube; use tweezers to place the root tip at the bottom of the centrifuge tube, add 2 steel balls to each centrifuge tube; add 400 μL CTAB buffer, cover the centrifuge tube cap, and place Place the centrifuge tube on a special 45-hole plate for the grinding machine; clamp the 45-hole plate on the grinder, and grind for 30 seconds; take the centrifuge tube out of the 45-hole plate, place it on a 24-hole rack, and heat it in a water bath at 65°C for 1 hour. Invert the centrifuge tube up and down for 3-5 times within 10 minutes to ensure that the CTAB buffer can fully extract the DNA in the tissue; add 400 μL 24:1 chloroform / isoamyl alcohol, and mix up an...

Embodiment 2

[0030] The method for detecting the purity of Jinyou No. 401 cucumber hybrid seeds is characterized in that it is carried out according to the following steps:

[0031] (1) Genomic DNA was extracted from cucumber hybrid seeds of Jinyou 401;

[0032] (2) PCR amplification: add Jinyou 401 Cucumber hybrid seed genomic DNA 20ng into a thin-walled tube dedicated to PCR amplification, then add 25ng of upstream primers, 25ng of downstream primers, 1 times Mg-containing 2+ PCR buffer, dNTP 2mmol, Taq DNA polymerase 1 unit, add sterile double distilled water to 10μl; put the special thin-walled tube for PCR amplification into the PCR instrument for amplification, the amplification conditions are: 94 ℃ pre-denaturation for 180 seconds ; Denaturation at 94°C for 30 seconds, annealing at 50-55°C for 30 seconds, extension at 72°C for 60 seconds, 30 cycles; extension at 72°C for 7 minutes, the amplification is complete;

[0033](3) Gel electrophoresis analysis of PCR amplification products...

Embodiment 3

[0035] Comparative Test

[0036]

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PUM

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Abstract

The invention discloses a nucleotide sequence for detecting the purity of Jinyou #401 cucumber hybrid seeds. The nucleotide sequence has nucleotide as shown in SEQ ID NO:1-2. A method for identifying the purity of the cucumber seeds by using the nucleotide sequence comprises the following steps: (1) extracting DNA of a tested material; (2) performing PCR amplification by using the nucleotide sequence as shown in SEQ ID No.1 and the nucleotide sequence as shown in SEQ ID No.2 in the sequence table; (3) performing gel electrophoresis analysis on amplified DNA fragments; and (4) identifying the purity of the cucumber seeds according to the conditions of strips of detected samples on gel. The nucleotide sequence has the advantages of rapidness, simplicity and convenience, stability, reliability, low cost, no environment condition influence and the like, and has great application values in cucumber seed purity identification.

Description

technical field [0001] The invention relates to a DNA sequence in biotechnology and a method for identifying the purity of Jinyou 401 cucumber hybrid seeds using the sequence. Background technique [0002] Seed purity identification is a key link to ensure seed quality. With the acceleration of the breeding process, the number of new cucumber varieties is increasing, and the amount of materials that need to be identified for variety purity will increase. In the past, the conventional purity identification was carried out in the field. During the fruiting period, experts went to the field to observe the characteristics and consistency of the varieties. There was a long cycle, a heavy workload, and it was easily affected by environmental factors, and the phenotypic characteristics would have a certain degree of deviation. Problems such as these may affect the accuracy of variety purity identification, and directly affect the promotion of improved varieties; in addition, due t...

Claims

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Application Information

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IPC IPC(8): C12Q1/68C12N15/11
CPCC12Q1/6895
Inventor 崔兴华韩毅科杜胜利魏爱民刘楠陈正武赵海燕
Owner TIANJIN RES INST OF VEGETABLE
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