Kit for screening deaf gene of Chinese populations, and use method thereof

A deafness gene and kit technology, applied in the field of deafness gene screening kits in Chinese population, can solve the problems of low throughput, expensive gene chip technology platform, time-consuming and labor-intensive, etc.

Inactive Publication Date: 2013-10-16
SUZHOU MUNICIPAL HOSPITAL
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  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0008] At present, traditional gene mutation detection methods include single strand conformation polymorphism (Single Strand Conformation Polymorphism, SSCP), PCR-restriction fragment length polymorphism (Restriction Fragment Length Polymorphism, RFLP), denaturing high performance liquid chromatography (Denaturing High Performance Liquid Chromatography, DHPLC), direct sequencing, gene chips, etc. These methods either have limited detection capabilities, or low throughput, or are time-consuming and labor-intensive, and require expensive equipment and consumables
More importantly, it is difficult to perform high-throughput detection of multiple mutation sites of different genes at the same time in these methods except for gene chips, and the gene chip technology platform is expensive, requires high quality equipment and personnel, and is difficult to be used in the majority of medical institutions in my country. Therefore, it is necessary to create a high-throughput, high-efficiency, low-cost deafness gene mutation screening method to achieve rapid clinical detection or large-scale population screening

Method used

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  • Kit for screening deaf gene of Chinese populations, and use method thereof
  • Kit for screening deaf gene of Chinese populations, and use method thereof
  • Kit for screening deaf gene of Chinese populations, and use method thereof

Examples

Experimental program
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Effect test

Embodiment 1

[0068] Implementation example 1, such as figure 2 with image 3 As shown, the hotspot screening detection of gene mutations in deaf patients:

[0069]Sample selection: The samples came from the DNA library of non-syndromic patients in the Reproductive and Genetic Center of Suzhou Municipal Hospital. They were all patients in the southern Jiangsu area mainly in Suzhou, including 71 males and 54 females. All patient samples in the library were collected before All signed the informed consent and promised to cooperate with the follow-up diagnosis and follow-up.

[0070] In step 1, a multiplex PCR amplification reaction was carried out for the 8 segments of the deafness gene.

[0071] PCR reaction system 10μl, containing 10ng of genomic DNA extracted in step 1, dNTP 2mM, 10×Buffer (containing Mg 2+ ) 1.0 μl, MgCl 2 25mM, FastTaq enzyme 0.15U, the final concentration of each amplification primer pair is 0.1μM. The PCR reaction conditions are: pre-denaturation at 95°C for 4 min...

Embodiment 2

[0083] Example 2, in vitro detection of newborn deafness gene mutation hotspot screening

[0084] The type I kit (96 copies) suitable for neonatal heel blood spot contains the following components:

[0085] (1) PCR reaction reagent group I, including 2mM dNTP150μl, 10×PCR buffer 100μl, 25mM MgCl 2 Solution 100 μl, deionized water 200 μl, primer mix I 400 μl, 5 U / μl FastTaq enzyme 15 μl;

[0086] (2) Purification reagent set, including 300 μl of 1U / μl SAP enzyme, 40 μl of 5 U / μl Exon I enzyme, and 260 μl of deionized water;

[0087] (3) PCR reaction reagent group II, 5×seq Buffer 120 μl, primer mixture II 100 μl, SNaPShot Mix 100 μl, deionized water 180 μl;

[0088] (4) GJB2 gene 235delC homozygous, heterozygous mutation positive control DNA sample 10 μl each, negative control sample 10 μl;

[0089] (5) Instruction manual.

[0090] Sample selection: The samples were obtained from 223 dried blood samples left after routine newborn genetic metabolic disease screening in the R...

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Abstract

The invention discloses a kit for one-time qualitative screening of common seven mutational sites of deaf gene of Chinese populations, and a use method thereof. Seven mutational hotspots which comprise delC of a 235th site of GJB2 gene, delAT of 299-300th sites of the GJB2 gene, A-G mutation of a 2168th site of SLC26A4 gene, A-G mutation of an IVS7-2th site of the SLC26A4 gene, A-G mutation of a 1555th site of mitochondrial DNA gene, A-G mutation of a 3243th site of the mitochondrial DNA gene, and A-G mutation of a 7445th site of the mitochondrial DNA gene are treated as detection objects, application primers and extension primers are respectively designed for the mutation of each site, multiple PCR amplification and markup extension are simultaneously carried out on each target site, and genotypes of above seven sites can be obtained at once through capillary electrophoretic analysis. The screening method and the kit of the invention have advantages of convenient use, simple operation, low cost, high flux, and direct and reliable detection result, and are suitable for large scale screening of the deaf gene mutation of the Chinese populations.

Description

technical field [0001] The invention relates to the field of gene mutation detection in the technical field of genetic engineering, in particular to a kit for screening deafness genes in Chinese population and a method for using the same. Background technique [0002] Deafness is a common condition that seriously affects quality of life and communication. There are more than 700 million people in the world suffering from moderate or above hearing loss. Among the 61 million people with disabilities in my country, 27 million are hearing and language disabled, and the number of newborn deaf children is increasing at a rate of 30,000 per year. Among them, hereditary NSHL ( nonsyndromic hearing loss, non-syndromic hearing loss) accounts for about 40%. So far, 28 autosomal recessive genes, 22 autosomal dominant genes, and 1 X-linked gene related to non-syndromic deafness have been cloned, and there are a large number of deafness mutation sites in each gene, Among them, the mutati...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12Q1/68
Inventor 陈瑛
Owner SUZHOU MUNICIPAL HOSPITAL
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