VR gene order of diffuse large B cell lymphoma related antigen specific TCR V alpha 23 subfamily and uses thereof
A technology of gene sequence and B cell, applied in the field of nucleotide sequence of T cell receptor, can solve the problem of understanding antigen
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[0042] (1) Analysis of antigen-specific TCR gene sequence
[0043] The method for analyzing the length and base sequence of CDR3 of TCR Vα gene profile is to analyze the length of CDR3 of 29 subfamilies of TCR Vα by using RT-PCR-gene scanning method. First, the peripheral blood of patients with DLBL was collected, and the peripheral blood mononuclear cells were separated by Ficoll stratification method, and 1*10 7 RNA was extracted from PBMCs (peripheral blood mononuclear cells), and cDNA was synthesized by RT-PCR. At the same time, the gene sequence of the TCRα chain was found in the NCBI gene bank, and the positions of the V and C regions of each subfamily in the genome were marked. Design corresponding 29 Vα-specific upstream primers based on the cDNA of 29 Vα subfamily genes, and set a Cα downstream primer in the Cα region, and use PCR technology to amplify the V-N-JC region generated by the TCR rearrangement of the 29 Vα subfamily genes in patients . As shown in Figure...
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