A heat shock protein malthsp20-11 of Monochamus alternatus and its coding gene and application
A technology of heat shock protein, Monochamus alternatus, applied in the field of heat shock protein, can solve the problems of less research on HSP20, and achieve the effect of high application value
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Embodiment 1
[0024] Example 1: Cloning of the heat shock protein MaltHSP20-11 gene of P. pineapple
[0025] 1. Obtain the gene sequence of the heat shock protein MaltHSP20-11 of A. chinensis
[0026] The experimental materials were taken from the laboratory-raised S. chinensis. After molting, the 4th instar larvae were continuously reared for 3 days, then subjected to high temperature stress at 40 °C for 3 h and then quickly frozen in liquid nitrogen and stored in a -80 °C refrigerator as a heat treatment group. At the same time, the feeding conditions were 25 The larvae of the same age at ℃ were quick-frozen in liquid nitrogen and stored in a -80 ℃ refrigerator as a control group. Each 3 larvae were mixed into a sample, and each sample had 3 biological replicates. After the samples were prepared, they were sent to Shanghai Meiji Biological Co., Ltd. for transcriptome sequencing.
[0027] The Illumina sequencing platform was used to complete transcriptome sequencing. After removing seque...
Embodiment 2
[0069] Example 2: Bioinformatics analysis of the heat shock protein MaltHSP20-11 gene of A. pineapple
[0070] ExPasy software showed that the heat shock protein MaltHSP20-11 gene of A. pineapple is encoded by 176 amino acids, and its amino acid sequence is shown in SEQ ID NO. For hydrophilic protein (-3.311-1.211).
[0071] The subcellular localization of CELLO shows that the protein is located in the nucleus.
[0072] BLAST comparison showed that the heat shock protein MaltHSP20-11 gene of P. pineapple contains a metazoan_ACD domain, which is a member of the heat shock protein 20 family.
[0073] By MEGA6.0 software, based on 1000 alignments, the heat shock protein MaltHSP20-11 gene of P. The phylogenetic tree constructed from the heat shock protein gene sequences of the order insects showed that the heat shock protein MaltHSP20-11 gene of P. .1) and HSP20-11 of Ceratocystis chinensis (QEL52520.1).
Embodiment 3
[0074] Example 3: Analysis of the expression pattern of the heat shock protein MaltHSP20-11 gene of A. pineapple under high temperature stress
[0075] The obtaining method of template cDNA is the same as "3. cDNA synthesis" in Example 1, and uses Rnase-Free H 2 O diluted to 0.1 μg / μL.
[0076] Fluorescent quantitative PCR reaction primers were designed by NCBI (Primer designing tool) as follows:
[0077] HSP20-11-qF:5'-GCCTCTCCATCCATCTCGAA-3'
[0078] HSP20-11-qR: 5'-GTTACTGTTGATCCCGTGTCG-3'
[0079] Construction of real-time quantitative PCR reaction system: HieffqPCR SYBR Green Master Mix (Yesen, China) 10 μL, RNase-Free H 2 O 7.2 μL, upstream and downstream primers (10 μmol / L) each 0.4 μL, cDNA 2 μL. After the amplification, a melting curve was obtained, and whether each pair of primers was specific and whether there was a primer-dimer was judged according to the presence or absence of a single peak.
[0080] Real-time PCR reactions were performed on a 7500 Real-Time ...
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