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Tilapia mossambica and microsatellite identification primer and method for genetic diversity of tilapia mossambica

A technology of genetic diversity and microsatellites, which is applied in the field of microsatellite identification primers for tilapia and its genetic diversity, can solve the problems of affecting the breeding effect, bottleneck effect, and reduction of the number of effective populations, and achieve good separation effect Effect

Pending Publication Date: 2020-06-16
茂名市伟业罗非鱼良种场 +1
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Problems solved by technology

However, with the artificial breeding process, the closed breeding population is vulnerable to non-random mating, genetic drift, artificial directional selection pressure and other factors, resulting in a decrease in the number of effective populations and an increase in the probability of inbreeding. If manual intervention is not taken in time, Over time, it will inevitably reduce the selection response of each generation, affect the breeding effect, and even induce inbreeding depression and bottleneck effect

Method used

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  • Tilapia mossambica and microsatellite identification primer and method for genetic diversity of tilapia mossambica
  • Tilapia mossambica and microsatellite identification primer and method for genetic diversity of tilapia mossambica
  • Tilapia mossambica and microsatellite identification primer and method for genetic diversity of tilapia mossambica

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Embodiment 1

[0040] A microsatellite identification method for tilapia and its genetic diversity, comprising the following steps:

[0041] (1) Material selection: Select "Xin Jifu" tilapia breeding lines F13, F14 and F15 respectively, wherein the number of samples of F13 is 29, and the number of samples of F14 and F15 is 30. The tail fin of each specimen is cut and numbered Store in 95% ethanol for later use;

[0042] (2) Extraction of genomic DNA: use the tissue / cell genomic DNA rapid extraction kit to extract the genomic DNA of each tail fin of the specimen in step (1), and detect the concentration and purity of the DNA by agarose gel electrophoresis, and pass the detection DNA extracts were numbered and stored in a -40°C refrigerator for later use;

[0043] (3) Screening of microsatellite primers: 50 published Nile tilapia microsatellite loci were retrieved from the GenBank database, and Primer5.0 software was used to design primers to screen 15 pairs of effectively amplified microsate...

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Abstract

The invention provides a tilapia mossambica and a microsatellite identification primer and method for genetic diversity of the tilapia mossambica; the microsatellite identification primer and method are included, and the method comprises the following steps: material selection, genome DNA extraction, microsatellite primer screening, microsatellite primer PCR reaction, electrophoresis detection anddyeing, and data analysis. According to the method, a later generation (F13, F14 and F15) group for breeding the new GIFT tilapia is used as a research object; tracking and monitoring the genetic variation of the later generation population by using a microsatellite marker technology; on one hand, genetic diversity levels of different breeding generations are compared, and the influence of the breeding process on the genetic structure of the breeding population is analyzed; on the other hand, microsatellite identification markers capable of distinguishing different breeding generation populations are searched, and through comprehensive analysis of the two aspects, a scientific basis is provided for continuous breeding and breed conservation work of the later generation of new GIFT tilapiamossambica breeding.

Description

technical field [0001] The invention relates to the technical field of fish breeding, in particular to a microsatellite identification primer and method for tilapia and its genetic diversity. Background technique [0002] "Xin Jifu" tilapia is the third generation of Nile tilapia "GIFT" strain introduced by Shanghai Fisheries University in 1994 as the basic group (F0) (Li Sifa, 2001), and has been systematically selected for 10 years since 1996 The new variety formed, its F8 was approved and named by the National Aquatic Original Species and Improved Variety Approval Committee in January 2006 (registration number GS01-001-2005), and the Ministry of Agriculture announced (No. 631) that it was an excellent variety promoted nationwide (Li Sifa et al., 2008). In view of the concept that there is no permanent good breed and the requirement of the era of innovation, on the basis of the breeding line F8, the research team insisted on the continuous breeding of "Xinjifu" tilapia. B...

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Application Information

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IPC IPC(8): C12Q1/6888C12Q1/686C12N15/11
CPCC12Q1/6888C12Q1/686C12Q2600/156C12Q2565/125C12Q2537/165
Inventor 简伟业赵金良唐首杰
Owner 茂名市伟业罗非鱼良种场
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