Use of PD-L1 spliceosome B as a marker to guide the dosing of anti-PD-L1/PD1 immunotherapy
An immunotherapy, PD-L1 technology, applied in the field of biomedicine and tumor immunotherapy, can solve the problems that no research has shown the role and mechanism of the three splice bodies, and no research has shown the role of cancer
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Embodiment 1
[0159] Example 1 Analysis of the expression of PD-L1 in colorectal cancer cell lines
[0160] All colorectal cancer cell lines in the laboratory were collected for PD-L1 western bolt detection, and the results were as follows Figure 3a shown. Among them, the antibody of PD-L1 is Abcam Company: Anti-PD-L1 antibody [28-8] (ab205921). It can be seen from the figure that among the common cell lines of colorectal cancer, only RKO and RKO-MUT cell lines have PD-L1 expression. Among them, RKO-MUT cells are mutant cells of RKO cells, which are preserved by the pathology laboratory of Zhejiang University School of Medicine. The inventor promises that the cells can provide the cell line to the public free of charge within 20 years from the date of patent application.
Embodiment 2
[0161] Example 2 RNAi interferes with the expression of PD-L1 of RKO / RKO-MUT
[0162] Detection of PD-L1 expression in RNAi RKO / RKO-MUT cell lines, in which the siRNA sequences used are shown in the table below:
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[0165] The result is as Figure 3b shown. It can be seen from the figure that after RNAi, the expression of PD-L1 in RKO / RKO-MUT cells decreased, and the expression of PD-L1 in RKO cell lines decreased more significantly than in RKO-MUT cell lines. In addition, surprisingly, the inventors observed that the band position of PD-L1 in the RKO-MUT cell line is different from that in the RKO cell line, suggesting that there may be multiple alternative splicing forms of PD-L1. After retrieval, Homo sapiens PD-L1 protein has three natural alternative splicing forms, namely isoforma / b / c, and the comparison relationship between the encoded nucleotide sequences can be seen in Figure 1, and the encoded polypeptide The sequences can be found in NCBI ac...
Embodiment 3
[0166] Example 3 RT-qPCR detection of the expression of three splice bodies in different colorectal cancer cell lines
[0167] Primers were designed in the common sequence regions of the 3 variants, and all 3 variants could be detected; primers were designed for the 3 variants, and only a specific variant could be detected. The mRNA expression of the three variants was detected by qPCR, and the primer sequences are shown in the table below:
[0168] Primer name sequence(5'to3') SEQ ID NO: PDL1-qPCR-F GCCGAAGTCATCTGGACAAG 10 PDL1-qPCR-R AGTGTGCTGGTCACATTGAA 11 PDL1-a-F ATGCTGCACTTCAGATCACAGA 12 PDL1-a-R TCACATCCATCATTCTCCCTTTT 13 PDL1-b-F GGCATTTGCTGAACGCCCC 14 PDL1-b-R TGCTTGTCCAGATGACTTCGG 15 PDL1-c-F TGATCAGCTATGGTGGTGCC 16 PDL1-c-R GTGCTAGGGGACAGTGTTAGA 17 β-actin-F GTCATTCCAAATATGAGATGCGT 18 β-actin-R GCTATCACCTCCCCTGTGTG 19
[0169] The result is as Figure 4 As shown, simil...
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