Visual detection method of isothermal amplification products of nucleic acids
A technology of isothermal amplification and detection method, which is applied in the direction of biochemical equipment and methods, microbial measurement/inspection, etc., and can solve problems such as endangering the health of operators, the influence of subjective factors of testers, and restrictions on popularization and application.
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Embodiment 1
[0027] Amplification detection of specific gene IS6110 of human pathogenic Mycobacterium tuberculosis
[0028] Primer design
[0029] The 812-1045 nucleic acid sequence of the Shigella specific gene IS6110 was screened by consulting the literature and using BLAST software analysis, targeting at eight sites of this fragment (these eight sites are respectively: 812-831bp, 847-865 bp, 872–889 bp, 904–925 bp, 946–965 bp, 967–986, 996-1015 bp, and 1029–1045 bp) LAMP primers were designed and synthesized to obtain the following primers; primers were designed by LAMP-specific primer design The software is complete.
[0030] Forward outer primer F3—IS6110 AGACCTCACCTATGTGTCGA
[0031] Reverse outer primer B3—IS6110 TCGCTGAACCGGATCGA
[0032] Forward inner primer FIP-IS6110 ATGGAGGTGGCCATCGTGGAAGTTTTTCCTACGTGGCCTTTGTCAC
[0033] Reverse internal primer BIP—IS6110 AAGCCATCTGGACCCGCCAATTTTCCCCTATCCGTATGGTGGAT
[0034] Forward loop primer LF—IS6110 AGGATCCTGCGAGCGTAG
[0035] Revers...
Embodiment 2
[0043] Shigella specific genes in food iP amplification detection
[0044] Primer design
[0045] The nucleic acid sequence at position 232-437 of the Shigella specific gene ipaH was screened out by consulting the literature and using BLAST software analysis, targeting eight sites of the fragment (these eight sites were respectively: 233-254bp, 256-273 bp, 275-294 bp, 302-323bp, 341-362bp, 363-382bp, 386-405bp and 420-438bp) designed and synthesized LAMP primers to obtain the following primers; the primer design was completed by LAMP-specific primer design software.
[0046] Forward outer primer F3—ipaH CATGGCTGGAAAAACTCAGTGC
[0047] Reverse outer primer B3—ipaH GAGGCGGAACATTTCCCTG
[0048] Forward internal primer FIP—ipaH TCCTCACAGCTCTCAGTGGCATTTTTCTGCGGAGCTTCGACAG
[0049] Reverse inner primer BIP—ipaH ATCTCCGGAAAACCCTCCTGGTTTTTAGCGCCGGTATCATTATCGA
[0050] Forward loop primer LF—ipaH AGCAGCAACAGCGAAAGACT
[0051] Reverse loop primer LB—ipaH CCATCAGGCATCAGAAGGCC
[00...
Embodiment 3
[0059] Amplification and Detection of Macrobrachium rosenbergii Nodavirus RNA-2
[0060] Primer design
[0061] By reviewing the literature and analyzing with BLAST software, the Macrobrachium rosenbergii Nodavirus-specific gene fragment RNA-2 was screened out, targeting eight sites of the fragment (these eight sites were: 1976-1994bp, 1997-2007bp, 2007- 2032bp, 2057-2076bp, 2107-2136bp, 2171-2147bp, 2195-2178bp and 2198-2216bp) LAMP primers were designed and synthesized to obtain the following primers; the primer design was completed by LAMP-specific primer design software.
[0062] Forward outer primer F3—RNA-2 CCAATATGAACCGGGAGTG
[0063] Reverse outer primer B3—RNA-2 GGGTTCAACCTTGAGTTCC
[0064] Forward internal primer FIP—RNA-2 TCAGCCTAACTGCTGCGTATTTTTGGTTAAGAGTGGTAGTCCAA
[0065] Reverse inner primer BIP—RNA-2 TGGCTTAAGTTTCGGCGACGTTTTAC CAAGTTGTTCGACGAC
[0066] Forward loop primer LF—RNA-2 TGACAAGCAATATCAACTCAGATGG
[0067] Reverse loop primer LB—RNA-2 TGATCATCAGCC...
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