Amphioxus dimethyl arginine hydrolase AmphiDDAH gene and its application
A kind of amphioxus, gene technology, applied in the direction of hydrolase, application, genetic engineering, etc., can solve the problem of few research reports on DDAH and so on
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Embodiment 1
[0024] Example 1: Extraction of total RNA and cDNA synthesis of Amphioxus neuroblastus
[0025] Extraction of total RNA and cDNA synthesis: Collect amphioxus neuroblasts, use Trizol reagent method to extract neuroblast total RNA, and phenol / chloroform extraction to remove protein to obtain amphioxus neuroblast total RNA, its A 260 / A 280 =1.828, two clear 18s and 28s bands can be seen by 1% formaldehyde denaturing gel electrophoresis, the ratio is more than 1 (see figure 2 ), indicating that the total RNA has good integrity and purity. Take 1ug of total RNA, use SMART III olignuclotide (5′-AAGCAGTGGTATCAACGCAGAGTGGCCATTATGGCCGGG-3′) and CDSIII / 3′ PCR primers (5′-ATTCTAGAGGCCGAGGCGGCCGACATG-d(T) 30 N -1 N-3') Reverse transcription is performed to synthesize the first strand, and 10 μl one-strand cDNA product is obtained.
[0026] Take 2ul cDNA one-strand product, and use 5'-PCR Primer (5'-TTCCACCCAAGCAGTGGTATCAACGCAGAGTGG-3') and 3'-PCR Primer (5'-GTATCGATGCCCACCCTCTAGAGGCCGAGGCGG...
Embodiment 2
[0027] Example 2: Determination and analysis of AmphiDDAH gene sequence of amphioxus neuroblastus
[0028] The two-stranded cDNA was ligated to pcDNA3.0 vector, transformed into DH5α Escherichia coli, and selected recombinant clones for sequencing. Blast homology analysis showed that the EST sequence encoding the full-length AmphiDDAH gene was obtained. The length of the gene is 822 bp, which encodes 274 amino acids. DDAH Protein, is a new DDAH protein.
[0029]Using ClustalW analysis software to compare the reported DDAH protein sequences of different species, the results are as follows figure 1 Shown.
[0030] From figure 1 It can be seen that the three active sites of DDAH are relatively conserved in different species.
Embodiment 3
[0031] Example 3: Recombinant P DDAH Construction of expression plasmid
[0032] A pair of primers were synthesized based on the sequence of both ends of the AmphiDDAH gene. The upstream primer contained Kpn I and Prescission protease cleavage sites, and the downstream primer contained Not I cleavage sites.
[0033] Upstream primer (P1):
[0034] 5’CGG GGT ACC CTG GAA GTT CTG TTC CAG GGG CCC ATG GCG
[0035] Kpn I Prescission protease cleavage site
[0036] GAT TTC TGT TGG AAT TT3’;
[0037] Downstream primer (P2):
[0038] 5’ATAAGAAT GCGGCCGC TTA CTA GAA CAG CAG AGA TTG GCA CGT C3’;
[0039] Not I
[0040] Using the pcDNA3.0 plasmid (purchased from Invitrogen) containing the AmphiDDAH gene as a template, and P1 and P2 as primers for PCR amplification, a specific amplified single band was obtained, and the size of the product was about 800 bp. The PCR amplification product was cloned into the prokaryotic fusion expression vector pETTRX to obtain the ...
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